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The map label for this gene is cbbZ [H]

Identifier: 89054464

GI number: 89054464

Start: 1966702

End: 1967343

Strand: Direct

Name: cbbZ [H]

Synonym: Jann_1973

Alternate gene names: 89054464

Gene position: 1966702-1967343 (Clockwise)

Preceding gene: 89054462

Following gene: 89054471

Centisome position: 45.55

GC content: 64.33

Gene sequence:

>642_bases
ATGGCGCGCATCGTATTCGACCTCGATGGCACATTGATCGACAGCGCACAGGATATCACGTCTGCGGCCAATGCCACCCT
TGCGGAGGTGGACGCAGACCCCTTGAGCCTTGCGGAGGCGCGCAGCTTTGTCGGGTCCGGTGCCGTGGTCTTCGTGGAGC
GGATGGCCCGCGCGCGCGATCTGGCTGATCCCGAACCGCTCCTTCCCCGGTTTGTCCACCACTATGAGCACGCCGTCCAT
GACACAGTGATCTACCCCGGCGTTGAGGCAGCATTGGCTGCATTAAAGGCCCACGGCCACCGTCTGGGTCTGTGCACCAA
CAAGCCCGGCAGCCCGACCCGTGCAGTTCTGGCGCATCTGGGGTGGGAGCGGCTGTTCGAGGTGGTCTTCACCGGCGACA
GTCTGCCCCAACGCAAGCCCGATCCGGCACCGCTTTTGGCCGCGTTTGATGCCTTGGGCGATGGCCCGGCGATCTATGTG
GGCGACAGTGAGGTTGATGCCGAAACTGCGGAGCGCGCTGATGTGCCGTTCGTGCTCTACACGCCCGGCTATCGAACGGC
GCCTCTGGACGACCTCGTTCACGCGGCGGCCTTCGATGATTGGGCAAGGGTGCCGTGGATCGTCGCGGATCTGACCGGCT
AA

Upstream 100 bases:

>100_bases
GTGATAGGGGGGCAGGGTCATGGGCGTCTCCGTGGCTTGGCCTTGTATCCCCCCAGGCCCCCCGATACCTCAAGGACAAT
TTCGCACGGAGGAGACGCCC

Downstream 100 bases:

>100_bases
GGGTTTGGAGTTTGCCCGCAGCCGTGCCACGTTGAGCCGAGGGGAGATCGCGCAATGGATATCATGTTCTGGGCATTCGG
AGCCATTGCTGCACTTGCGG

Product: phosphoglycolate phosphatase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MARIVFDLDGTLIDSAQDITSAANATLAEVDADPLSLAEARSFVGSGAVVFVERMARARDLADPEPLLPRFVHHYEHAVH
DTVIYPGVEAALAALKAHGHRLGLCTNKPGSPTRAVLAHLGWERLFEVVFTGDSLPQRKPDPAPLLAAFDALGDGPAIYV
GDSEVDAETAERADVPFVLYTPGYRTAPLDDLVHAAAFDDWARVPWIVADLTG

Sequences:

>Translated_213_residues
MARIVFDLDGTLIDSAQDITSAANATLAEVDADPLSLAEARSFVGSGAVVFVERMARARDLADPEPLLPRFVHHYEHAVH
DTVIYPGVEAALAALKAHGHRLGLCTNKPGSPTRAVLAHLGWERLFEVVFTGDSLPQRKPDPAPLLAAFDALGDGPAIYV
GDSEVDAETAERADVPFVLYTPGYRTAPLDDLVHAAAFDDWARVPWIVADLTG
>Mature_212_residues
ARIVFDLDGTLIDSAQDITSAANATLAEVDADPLSLAEARSFVGSGAVVFVERMARARDLADPEPLLPRFVHHYEHAVHD
TVIYPGVEAALAALKAHGHRLGLCTNKPGSPTRAVLAHLGWERLFEVVFTGDSLPQRKPDPAPLLAAFDALGDGPAIYVG
DSEVDAETAERADVPFVLYTPGYRTAPLDDLVHAAAFDDWARVPWIVADLTG

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stres

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

Organism=Escherichia coli, GI1789787, Length=215, Percent_Identity=32.093023255814, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402
- InterPro:   IPR005833
- InterPro:   IPR006346
- InterPro:   IPR023198 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 22830; Mature: 22699

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIVFDLDGTLIDSAQDITSAANATLAEVDADPLSLAEARSFVGSGAVVFVERMARARD
CCEEEEECCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
LADPEPLLPRFVHHYEHAVHDTVIYPGVEAALAALKAHGHRLGLCTNKPGSPTRAVLAHL
CCCCCHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
GWERLFEVVFTGDSLPQRKPDPAPLLAAFDALGDGPAIYVGDSEVDAETAERADVPFVLY
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEEE
TPGYRTAPLDDLVHAAAFDDWARVPWIVADLTG
CCCCCCCCHHHHHHHHHHCCHHCCCEEEEECCC
>Mature Secondary Structure 
ARIVFDLDGTLIDSAQDITSAANATLAEVDADPLSLAEARSFVGSGAVVFVERMARARD
CEEEEECCCCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
LADPEPLLPRFVHHYEHAVHDTVIYPGVEAALAALKAHGHRLGLCTNKPGSPTRAVLAHL
CCCCCHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHH
GWERLFEVVFTGDSLPQRKPDPAPLLAAFDALGDGPAIYVGDSEVDAETAERADVPFVLY
CHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCCCEEEE
TPGYRTAPLDDLVHAAAFDDWARVPWIVADLTG
CCCCCCCCHHHHHHHHHHCCHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA