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The map label for this gene is 89053679

Identifier: 89053679

GI number: 89053679

Start: 1149547

End: 1149933

Strand: Direct

Name: 89053679

Synonym: Jann_1188

Alternate gene names: NA

Gene position: 1149547-1149933 (Clockwise)

Preceding gene: 89053678

Following gene: 89053680

Centisome position: 26.62

GC content: 63.31

Gene sequence:

>387_bases
ATGACCGGCTCAGACGCATATACGCGCGGCAAGGCCATGGCCGAAGCGACGAACCCAGGGATCGAGGAGGCGCTGGCCAA
GCGCTATGACGCGGTCCTGCCGGGGTTCTCGACCACGATGATGGAAGTGGCGTTCGGCCATTATTACACGCGCGACGGCC
TCGACGACAAAACCCGCTATCTGGCGACGGTGGCAGCTTTGGCCGCGATGGGCGGACAGACCGCGCCGCAGTTGAAGGTG
CATACGCGCAACGCACTCCGCTCGGGCGCGACCCCGCGTGAAGTGGCCGAGGTGATCAACCAGATGGCGCTCTATGGTGG
GTTTCCCGCGATGATCAACGCGTTGAATGCGGCCCTTGAGGTGTTTGAGGAAGAGGGACAGGCATGA

Upstream 100 bases:

>100_bases
CCCGGGAAGAGCTGTATTACGACAAGGAAAAGTTGCTGGCCAACGGCGAACGTTGGGAATCGGCGATTGCCCACAATCTG
GAACTGGATGCCCCCTACCG

Downstream 100 bases:

>100_bases
GTGACACTGCGCAAAACCCGTTCGAGGCGCTGTTCAAGCAGACCCAGGACATGACCGAGGCATGGCTGAAAGCCGCCGCG
CCCGCGATGTCGTCTGGCCA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: URF5 [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTGSDAYTRGKAMAEATNPGIEEALAKRYDAVLPGFSTTMMEVAFGHYYTRDGLDDKTRYLATVAALAAMGGQTAPQLKV
HTRNALRSGATPREVAEVINQMALYGGFPAMINALNAALEVFEEEGQA

Sequences:

>Translated_128_residues
MTGSDAYTRGKAMAEATNPGIEEALAKRYDAVLPGFSTTMMEVAFGHYYTRDGLDDKTRYLATVAALAAMGGQTAPQLKV
HTRNALRSGATPREVAEVINQMALYGGFPAMINALNAALEVFEEEGQA
>Mature_127_residues
TGSDAYTRGKAMAEATNPGIEEALAKRYDAVLPGFSTTMMEVAFGHYYTRDGLDDKTRYLATVAALAAMGGQTAPQLKVH
TRNALRSGATPREVAEVINQMALYGGFPAMINALNAALEVFEEEGQA

Specific function: May have a role in the regulation of NDH-1 biosynthesis [H]

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 13678; Mature: 13546

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSDAYTRGKAMAEATNPGIEEALAKRYDAVLPGFSTTMMEVAFGHYYTRDGLDDKTRY
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
LATVAALAAMGGQTAPQLKVHTRNALRSGATPREVAEVINQMALYGGFPAMINALNAALE
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VFEEEGQA
HHHHCCCC
>Mature Secondary Structure 
TGSDAYTRGKAMAEATNPGIEEALAKRYDAVLPGFSTTMMEVAFGHYYTRDGLDDKTRY
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHH
LATVAALAAMGGQTAPQLKVHTRNALRSGATPREVAEVINQMALYGGFPAMINALNAALE
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VFEEEGQA
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8422400 [H]