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The map label for this gene is 89053680

Identifier: 89053680

GI number: 89053680

Start: 1149930

End: 1150355

Strand: Direct

Name: 89053680

Synonym: Jann_1189

Alternate gene names: NA

Gene position: 1149930-1150355 (Clockwise)

Preceding gene: 89053679

Following gene: 89053681

Centisome position: 26.63

GC content: 63.15

Gene sequence:

>426_bases
ATGAGTGACACTGCGCAAAACCCGTTCGAGGCGCTGTTCAAGCAGACCCAGGACATGACCGAGGCATGGCTGAAAGCCGC
CGCGCCCGCGATGTCGTCTGGCCAGTTCGAGAAGATGTGGCCCCAAGTTCCGGCAGAGATGCTGGAGGCATTCATGGGCA
AGCAGTTCAACCCCGGCGGGTTGGATGCGAAGACGCGGCTTTTGCTGACATTGCAGGGTCTGACCATTCAGGGCGCGCTG
GCCGAGATGCAGATCCGCATCACGGTGCGGCAGGCAATCTCCGTGGGCGCCACCCCGCAGGAAATTGCGGAGGCCATCGG
CATGGCGGGCCTGTTCGGCGGCGCACCGGCGATGACAAAGGCGATGGAACTGGCGAAGCAGGCCATCGACGGCGACGCAG
AGCCCAATTCCGGAGGGAATACCTGA

Upstream 100 bases:

>100_bases
TGGCCGAGGTGATCAACCAGATGGCGCTCTATGGTGGGTTTCCCGCGATGATCAACGCGTTGAATGCGGCCCTTGAGGTG
TTTGAGGAAGAGGGACAGGC

Downstream 100 bases:

>100_bases
CATGACGATTGTGGATTTCACCTTCTACCTTTTCGCGTTGTCCGTGGTTGCGGGCGGTCTGTTCACGGTCACTTCGAAAA
ACCCGGTGCATTCGGTCCTG

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: URF6 [H]

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSDTAQNPFEALFKQTQDMTEAWLKAAAPAMSSGQFEKMWPQVPAEMLEAFMGKQFNPGGLDAKTRLLLTLQGLTIQGAL
AEMQIRITVRQAISVGATPQEIAEAIGMAGLFGGAPAMTKAMELAKQAIDGDAEPNSGGNT

Sequences:

>Translated_141_residues
MSDTAQNPFEALFKQTQDMTEAWLKAAAPAMSSGQFEKMWPQVPAEMLEAFMGKQFNPGGLDAKTRLLLTLQGLTIQGAL
AEMQIRITVRQAISVGATPQEIAEAIGMAGLFGGAPAMTKAMELAKQAIDGDAEPNSGGNT
>Mature_140_residues
SDTAQNPFEALFKQTQDMTEAWLKAAAPAMSSGQFEKMWPQVPAEMLEAFMGKQFNPGGLDAKTRLLLTLQGLTIQGALA
EMQIRITVRQAISVGATPQEIAEAIGMAGLFGGAPAMTKAMELAKQAIDGDAEPNSGGNT

Specific function: May have a role in the regulation of NDH-1 biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 14916; Mature: 14785

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTAQNPFEALFKQTQDMTEAWLKAAAPAMSSGQFEKMWPQVPAEMLEAFMGKQFNPGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCC
LDAKTRLLLTLQGLTIQGALAEMQIRITVRQAISVGATPQEIAEAIGMAGLFGGAPAMTK
CCHHHEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
AMELAKQAIDGDAEPNSGGNT
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDTAQNPFEALFKQTQDMTEAWLKAAAPAMSSGQFEKMWPQVPAEMLEAFMGKQFNPGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCC
LDAKTRLLLTLQGLTIQGALAEMQIRITVRQAISVGATPQEIAEAIGMAGLFGGAPAMTK
CCHHHEEEEEECCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHH
AMELAKQAIDGDAEPNSGGNT
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8422400 [H]