Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is nuoI [H]
Identifier: 89053678
GI number: 89053678
Start: 1149056
End: 1149550
Strand: Direct
Name: nuoI [H]
Synonym: Jann_1187
Alternate gene names: 89053678
Gene position: 1149056-1149550 (Clockwise)
Preceding gene: 89053677
Following gene: 89053679
Centisome position: 26.61
GC content: 58.59
Gene sequence:
>495_bases ATGACGCAGATCGACTACACCCGCGCCGCGAAATATTTCCTGCTGGCGGACTTTTTCAAAGGCTTCAAGCTGGGGATGAA GTACTTCTTCGCCCCCAAGGTCACGATCAACTACCCGCATGAGAAGGGGCCTCTGTCGCCCCGCTTCCGCGGCGAACATG CGTTGCGGCGCTATCCCAACGGCGAAGAACGCTGCATCGCCTGCAAGCTGTGCGAAGCCATTTGCCCGGCGCAAGCGATC ACGATTGATGCAGAACCCCGCGAAGACGGGTCCCGCCGCACCACGCGGTATGACATCGACATGACCAAATGCATCTACTG CGGGTTCTGTCAGGAAGCCTGCCCGGTGGATGCCATCGTGGAGGGTCCAAATTTCGAGTTCGCGACCGAGACCCGGGAAG AGCTGTATTACGACAAGGAAAAGTTGCTGGCCAACGGCGAACGTTGGGAATCGGCGATTGCCCACAATCTGGAACTGGAT GCCCCCTACCGATGA
Upstream 100 bases:
>100_bases ACGCGCTTTTAGCCTTCGAGCCGAGTTTTCTGACCCGCGCAAACGTGCATCTCGTTGAGGGTGTTGTGAACAACATCGTA ACCCCATGTGTGGAGTTCCT
Downstream 100 bases:
>100_bases CCGGCTCAGACGCATATACGCGCGGCAAGGCCATGGCCGAAGCGACGAACCCAGGGATCGAGGAGGCGCTGGCCAAGCGC TATGACGCGGTCCTGCCGGG
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTQIDYTRAAKYFLLADFFKGFKLGMKYFFAPKVTINYPHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAI TIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKEKLLANGERWESAIAHNLELD APYR
Sequences:
>Translated_164_residues MTQIDYTRAAKYFLLADFFKGFKLGMKYFFAPKVTINYPHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAI TIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKEKLLANGERWESAIAHNLELD APYR >Mature_163_residues TQIDYTRAAKYFLLADFFKGFKLGMKYFFAPKVTINYPHEKGPLSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAIT IDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKEKLLANGERWESAIAHNLELDA PYR
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=157, Percent_Identity=75.7961783439491, Blast_Score=255, Evalue=1e-68, Organism=Escherichia coli, GI1788617, Length=117, Percent_Identity=43.5897435897436, Blast_Score=105, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17555194, Length=160, Percent_Identity=70, Blast_Score=239, Evalue=5e-64, Organism=Drosophila melanogaster, GI17864306, Length=157, Percent_Identity=75.1592356687898, Blast_Score=253, Evalue=6e-68,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 18974; Mature: 18843
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIDYTRAAKYFLLADFFKGFKLGMKYFFAPKVTINYPHEKGPLSPRFRGEHALRRYPN CCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCCCCHHHHCCCC GEERCIACKLCEAICPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEE EGPNFEFATETREELYYDKEKLLANGERWESAIAHNLELDAPYR ECCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TQIDYTRAAKYFLLADFFKGFKLGMKYFFAPKVTINYPHEKGPLSPRFRGEHALRRYPN CCCCHHHHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCCCCHHHHCCCC GEERCIACKLCEAICPAQAITIDAEPREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV CCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEE EGPNFEFATETREELYYDKEKLLANGERWESAIAHNLELDAPYR ECCCCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA