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The map label for this gene is yjgH [H]

Identifier: 89053600

GI number: 89053600

Start: 1069721

End: 1070119

Strand: Direct

Name: yjgH [H]

Synonym: Jann_1109

Alternate gene names: 89053600

Gene position: 1069721-1070119 (Clockwise)

Preceding gene: 89053599

Following gene: 89053601

Centisome position: 24.77

GC content: 64.41

Gene sequence:

>399_bases
ATGACCAAACCGCGCGCCATCACGCCCGCCGGGATGGAGGGGTATGTCGACGACTGGCACATGTCGCCGGGCCTGATGGT
CGGTGATTTCCTGTTCCTGACCGGCATGACGGGCGCGGGCCCGGACGGCATCGTTGACCCCGATCCGGAAACGCAGATCC
GGCTCGCGTTCCAACGGGCTGACGCCGTCTTGCAGGAGGCGGGTCTGAGCTTTGCGCATGTGGTTGAGATGACCAGCTAC
CATGTGGGTATTGCATCCCACATCGATGCATTTCGGGCGATCCGCAGCGAGTATGTCGCCGCGCCGCATCCCGCCTGGAC
GGCGATAGAAGTCGCCGGGTTCGTGACACCGGGCACCGTGTGTGAGTTGCGCATTGTCGCCCATCGGACCCCCGTGTGA

Upstream 100 bases:

>100_bases
TTGGCCAGGTCGGCACGGCCGAGCCGAAGTTGCGCCGGGAATATACGCTGTTTGACGAGACGTCCGTGTGGAAACAGATT
CTGCTGCATGAGGCGGCAAA

Downstream 100 bases:

>100_bases
TGGATACTATTGCGTCTGACAGATCGGCACGAAAAGCCTTGGTCGACCGTGTCGCAATGGATGTGGGGCGGATCATGTTC
ATTCTGAATTGGAGACGTCC

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTKPRAITPAGMEGYVDDWHMSPGLMVGDFLFLTGMTGAGPDGIVDPDPETQIRLAFQRADAVLQEAGLSFAHVVEMTSY
HVGIASHIDAFRAIRSEYVAAPHPAWTAIEVAGFVTPGTVCELRIVAHRTPV

Sequences:

>Translated_132_residues
MTKPRAITPAGMEGYVDDWHMSPGLMVGDFLFLTGMTGAGPDGIVDPDPETQIRLAFQRADAVLQEAGLSFAHVVEMTSY
HVGIASHIDAFRAIRSEYVAAPHPAWTAIEVAGFVTPGTVCELRIVAHRTPV
>Mature_131_residues
TKPRAITPAGMEGYVDDWHMSPGLMVGDFLFLTGMTGAGPDGIVDPDPETQIRLAFQRADAVLQEAGLSFAHVVEMTSYH
VGIASHIDAFRAIRSEYVAAPHPAWTAIEVAGFVTPGTVCELRIVAHRTPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1790696, Length=128, Percent_Identity=31.25, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14203; Mature: 14072

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPRAITPAGMEGYVDDWHMSPGLMVGDFLFLTGMTGAGPDGIVDPDPETQIRLAFQRA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
DAVLQEAGLSFAHVVEMTSYHVGIASHIDAFRAIRSEYVAAPHPAWTAIEVAGFVTPGTV
HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCE
CELRIVAHRTPV
EEEEEEECCCCC
>Mature Secondary Structure 
TKPRAITPAGMEGYVDDWHMSPGLMVGDFLFLTGMTGAGPDGIVDPDPETQIRLAFQRA
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
DAVLQEAGLSFAHVVEMTSYHVGIASHIDAFRAIRSEYVAAPHPAWTAIEVAGFVTPGTV
HHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCE
CELRIVAHRTPV
EEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]