Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053599
Identifier: 89053599
GI number: 89053599
Start: 1068735
End: 1069724
Strand: Direct
Name: 89053599
Synonym: Jann_1108
Alternate gene names: NA
Gene position: 1068735-1069724 (Clockwise)
Preceding gene: 89053598
Following gene: 89053600
Centisome position: 24.75
GC content: 63.94
Gene sequence:
>990_bases ATGAAGGGCTTCGACGCCAAATTCCGCGATTTCCCCGACTACATCGTCGGCATCACCAAGGAGATTTGGGAGGATCGCGG CATCGCGACCCTGCACGAGTATTACGCAGAAGACATCGTGGTGCGCTCTCCGGCCTCGGTCGTGACCGGCAACCAGGGCG TGATCGCGGCGACCATGGCAACGCTGGCCGAATTCCCGGACCGCGTGCTTCTGGGTGAAGATGTGATCTGGTCCGGCACG CCGGAGGACGGGATGCTGTCGTCGCACCGCATCATCAGTCAGGCGACCCATGCGGGCGATGGAGTGTACGGCGCGGCGAC GGGCAAAAGGCTGGAATACCGCATCCTCGCCGATTGCCATGCGAAGAATAACGCCATCGACGATGAATGGCTGATCCGCG ATCAGACCGCGATCGTGACGCAACTTGGTTGGACCCCGCGCGACTATGCCGCCGATCTGATCATGCGCGAAGGGGGGCCG GAGGCCTGTGTGAAGCCGCTGACGCCCGACACGGATCAGCCCGGCCCCTACAAGGGACGCGGCAATGACAACCCATGGGG CGAGCGGCTGGCCGATGTGCTGACCCGCATCATGGGTGCGGATATGGCCGCGATCCCAGAGGTGTATGACCGTGCCTGCC ATCTGGAATATCCCGGCCATGTCACCGCCCATGGCCCGGCAGAGGCCGACAGGTTCTGGATGTCCCTGCGCGCCGCCTTC CCGAACGCGGCGTTCACCATCGACCACCAGATCGGGCGCGAGGATGACCACATGCCGCCGCGCGCCGCGATCCGCTGGAG CCTGCACGGCACCCATGAAGGCTGGGGCGGGTTTGGCCAACCCACCGGTGCGGAGGTCTATATCGTCGGGATCACCCATG CGGAGTTTGGCCAGGTCGGCACGGCCGAGCCGAAGTTGCGCCGGGAATATACGCTGTTTGACGAGACGTCCGTGTGGAAA CAGATTCTGCTGCATGAGGCGGCAAAATGA
Upstream 100 bases:
>100_bases TTGATGAAATCGAAACCGGGCGCGCGCCTGGCACGCGGGTCGAGATTGAGGGGGAGCTGATCCTCCGCACCTCTGCCCGC CTTCCCAAAGGACCAACCAT
Downstream 100 bases:
>100_bases CCAAACCGCGCGCCATCACGCCCGCCGGGATGGAGGGGTATGTCGACGACTGGCACATGTCGCCGGGCCTGATGGTCGGT GATTTCCTGTTCCTGACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK QILLHEAAK
Sequences:
>Translated_329_residues MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK QILLHEAAK >Mature_329_residues MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK QILLHEAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36381; Mature: 36381
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMA CCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCHHHHHHH TLAEFPDRVLLGEDVIWSGTPEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCH HHHHCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECC AKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGPEACVKPLTPDTDQPGPYKGR CCCCCCCCHHEEECCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC GNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHC PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVG CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TAEPKLRREYTLFDETSVWKQILLHEAAK CCCCHHHHEEEECCHHHHHHHHHHHHCCC >Mature Secondary Structure MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMA CCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCHHHHHHH TLAEFPDRVLLGEDVIWSGTPEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCH HHHHCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECC AKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGPEACVKPLTPDTDQPGPYKGR CCCCCCCCHHEEECCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC GNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHC PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVG CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC TAEPKLRREYTLFDETSVWKQILLHEAAK CCCCHHHHEEEECCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA