Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053599

Identifier: 89053599

GI number: 89053599

Start: 1068735

End: 1069724

Strand: Direct

Name: 89053599

Synonym: Jann_1108

Alternate gene names: NA

Gene position: 1068735-1069724 (Clockwise)

Preceding gene: 89053598

Following gene: 89053600

Centisome position: 24.75

GC content: 63.94

Gene sequence:

>990_bases
ATGAAGGGCTTCGACGCCAAATTCCGCGATTTCCCCGACTACATCGTCGGCATCACCAAGGAGATTTGGGAGGATCGCGG
CATCGCGACCCTGCACGAGTATTACGCAGAAGACATCGTGGTGCGCTCTCCGGCCTCGGTCGTGACCGGCAACCAGGGCG
TGATCGCGGCGACCATGGCAACGCTGGCCGAATTCCCGGACCGCGTGCTTCTGGGTGAAGATGTGATCTGGTCCGGCACG
CCGGAGGACGGGATGCTGTCGTCGCACCGCATCATCAGTCAGGCGACCCATGCGGGCGATGGAGTGTACGGCGCGGCGAC
GGGCAAAAGGCTGGAATACCGCATCCTCGCCGATTGCCATGCGAAGAATAACGCCATCGACGATGAATGGCTGATCCGCG
ATCAGACCGCGATCGTGACGCAACTTGGTTGGACCCCGCGCGACTATGCCGCCGATCTGATCATGCGCGAAGGGGGGCCG
GAGGCCTGTGTGAAGCCGCTGACGCCCGACACGGATCAGCCCGGCCCCTACAAGGGACGCGGCAATGACAACCCATGGGG
CGAGCGGCTGGCCGATGTGCTGACCCGCATCATGGGTGCGGATATGGCCGCGATCCCAGAGGTGTATGACCGTGCCTGCC
ATCTGGAATATCCCGGCCATGTCACCGCCCATGGCCCGGCAGAGGCCGACAGGTTCTGGATGTCCCTGCGCGCCGCCTTC
CCGAACGCGGCGTTCACCATCGACCACCAGATCGGGCGCGAGGATGACCACATGCCGCCGCGCGCCGCGATCCGCTGGAG
CCTGCACGGCACCCATGAAGGCTGGGGCGGGTTTGGCCAACCCACCGGTGCGGAGGTCTATATCGTCGGGATCACCCATG
CGGAGTTTGGCCAGGTCGGCACGGCCGAGCCGAAGTTGCGCCGGGAATATACGCTGTTTGACGAGACGTCCGTGTGGAAA
CAGATTCTGCTGCATGAGGCGGCAAAATGA

Upstream 100 bases:

>100_bases
TTGATGAAATCGAAACCGGGCGCGCGCCTGGCACGCGGGTCGAGATTGAGGGGGAGCTGATCCTCCGCACCTCTGCCCGC
CTTCCCAAAGGACCAACCAT

Downstream 100 bases:

>100_bases
CCAAACCGCGCGCCATCACGCCCGCCGGGATGGAGGGGTATGTCGACGACTGGCACATGTCGCCGGGCCTGATGGTCGGT
GATTTCCTGTTCCTGACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT
PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP
EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF
PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK
QILLHEAAK

Sequences:

>Translated_329_residues
MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT
PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP
EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF
PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK
QILLHEAAK
>Mature_329_residues
MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMATLAEFPDRVLLGEDVIWSGT
PEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCHAKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGP
EACVKPLTPDTDQPGPYKGRGNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF
PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVGTAEPKLRREYTLFDETSVWK
QILLHEAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36381; Mature: 36381

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMA
CCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCHHHHHHH
TLAEFPDRVLLGEDVIWSGTPEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCH
HHHHCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECC
AKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGPEACVKPLTPDTDQPGPYKGR
CCCCCCCCHHEEECCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
GNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHC
PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVG
CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TAEPKLRREYTLFDETSVWKQILLHEAAK
CCCCHHHHEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKGFDAKFRDFPDYIVGITKEIWEDRGIATLHEYYAEDIVVRSPASVVTGNQGVIAATMA
CCCCCCCHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCEEECCCCHHHHHHH
TLAEFPDRVLLGEDVIWSGTPEDGMLSSHRIISQATHAGDGVYGAATGKRLEYRILADCH
HHHHCCCCEEECCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEECC
AKNNAIDDEWLIRDQTAIVTQLGWTPRDYAADLIMREGGPEACVKPLTPDTDQPGPYKGR
CCCCCCCCHHEEECCHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCC
GNDNPWGERLADVLTRIMGADMAAIPEVYDRACHLEYPGHVTAHGPAEADRFWMSLRAAF
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHC
PNAAFTIDHQIGREDDHMPPRAAIRWSLHGTHEGWGGFGQPTGAEVYIVGITHAEFGQVG
CCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
TAEPKLRREYTLFDETSVWKQILLHEAAK
CCCCHHHHEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA