Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89053601

Identifier: 89053601

GI number: 89053601

Start: 1070220

End: 1070717

Strand: Direct

Name: 89053601

Synonym: Jann_1110

Alternate gene names: NA

Gene position: 1070220-1070717 (Clockwise)

Preceding gene: 89053600

Following gene: 89053602

Centisome position: 24.79

GC content: 64.86

Gene sequence:

>498_bases
ATGAAAGCAGCCGCCCTTGTCGCCACCCTACTTGCCAGCCCCGTCGCAGCGGAGGGATTTGCCGTATCTGATCTGCAAAC
CCTCTCGGTTGATCTGTCGGCCTTGTCTGGCGGGACCTTTTTGGCCGAAGCCACCTCGCCGCAGCGATTGACGATCATGT
GCACGGATTGCGCAGCCTTCCAGGCCATAGACGTGCGCATCGGTCGCCAGGACGACGGCACGGAGGCGCGGCTGCGCGCA
GGCCAGACCACCATCGGTGATGTCCGCGCGATGTGTCAGGCCCGTGATCCGTCCTGCACGCTGGAGGGGATCGAACAGGG
CCGCGCCATCGGTTGGCTCACCACCTATGACGGTGCTGTGACGGGCAGCACGGCGCTGTTGTTTCTGGATGGCGATCTGC
TGACGATCCGGTCCATCGCCGATGATGTCACCACGGCGCGCCGCAACGTCGATGGCGTGCGCGCGGCCCTGGTCCCGGTG
ATTGTGGGGTCGGAATGA

Upstream 100 bases:

>100_bases
TGGATACTATTGCGTCTGACAGATCGGCACGAAAAGCCTTGGTCGACCGTGTCGCAATGGATGTGGGGCGGATCATGTTC
ATTCTGAATTGGAGACGTCC

Downstream 100 bases:

>100_bases
TCCGCGGCCCTTCGATATGGATCTGCGCGGTGGTCCTGCTGTCCGGTCTGGCCAGCGCCGCCGTGGCCCAGTCCCGGGAT
GCGGTGTTTCAGACCCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKAAALVATLLASPVAAEGFAVSDLQTLSVDLSALSGGTFLAEATSPQRLTIMCTDCAAFQAIDVRIGRQDDGTEARLRA
GQTTIGDVRAMCQARDPSCTLEGIEQGRAIGWLTTYDGAVTGSTALLFLDGDLLTIRSIADDVTTARRNVDGVRAALVPV
IVGSE

Sequences:

>Translated_165_residues
MKAAALVATLLASPVAAEGFAVSDLQTLSVDLSALSGGTFLAEATSPQRLTIMCTDCAAFQAIDVRIGRQDDGTEARLRA
GQTTIGDVRAMCQARDPSCTLEGIEQGRAIGWLTTYDGAVTGSTALLFLDGDLLTIRSIADDVTTARRNVDGVRAALVPV
IVGSE
>Mature_165_residues
MKAAALVATLLASPVAAEGFAVSDLQTLSVDLSALSGGTFLAEATSPQRLTIMCTDCAAFQAIDVRIGRQDDGTEARLRA
GQTTIGDVRAMCQARDPSCTLEGIEQGRAIGWLTTYDGAVTGSTALLFLDGDLLTIRSIADDVTTARRNVDGVRAALVPV
IVGSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17117; Mature: 17117

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAALVATLLASPVAAEGFAVSDLQTLSVDLSALSGGTFLAEATSPQRLTIMCTDCAAF
CCHHHHHHHHHHCCCCCCCEEECCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCE
QAIDVRIGRQDDGTEARLRAGQTTIGDVRAMCQARDPSCTLEGIEQGRAIGWLTTYDGAV
EEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCCC
TGSTALLFLDGDLLTIRSIADDVTTARRNVDGVRAALVPVIVGSE
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCHHHEEEEEEEECCC
>Mature Secondary Structure
MKAAALVATLLASPVAAEGFAVSDLQTLSVDLSALSGGTFLAEATSPQRLTIMCTDCAAF
CCHHHHHHHHHHCCCCCCCEEECCCEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCE
QAIDVRIGRQDDGTEARLRAGQTTIGDVRAMCQARDPSCTLEGIEQGRAIGWLTTYDGAV
EEEEEEECCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCCC
TGSTALLFLDGDLLTIRSIADDVTTARRNVDGVRAALVPVIVGSE
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCHHHEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA