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The map label for this gene is 89053508

Identifier: 89053508

GI number: 89053508

Start: 971648

End: 972145

Strand: Direct

Name: 89053508

Synonym: Jann_1017

Alternate gene names: NA

Gene position: 971648-972145 (Clockwise)

Preceding gene: 89053507

Following gene: 89053512

Centisome position: 22.5

GC content: 66.47

Gene sequence:

>498_bases
ATGAAGGTGATCGGTCTGGTGGCGATATGCGCCCTGCTGGCGGGGTGCGGCGGCGGGATTTTGGGGATCGGCGGTGGGGC
GGAACCGGTGCAGGTGCAGCAGGGCCTCTACCCCGGCGAAACGCCGGAAATGCGCGCCTTGGTGGTGGAATACGCCACCC
GCCATGGGATCCCGGAGGCGCTGTTGCACCGGGTGATCCAGCGTGAAAGCGACTACCGTGCCGATGCGCGCAATGGGCCA
TATTACGGGCTGATGCAGATCCTGCCGCAGACGGCGGGCACGATGGGGTTCACGGGCGCACCGAATGACCTGCTGGATGC
GCGCACGAACCTGGAATATGCGGGCCGCTACCTGCGCGGCGCTTGGCTGGTGAGCGACGGCGATATCGACGAGGCCGTGG
GATGGTATGCGCGGGGCTACTATTATGAAGCACGAGACCGGTGCCTTCTGGTGGAAACGGGCCTGCGCGAGCGCGAGGTC
AACCGCGCCTGCGGGTAG

Upstream 100 bases:

>100_bases
TTCAGGCGGGCGACACGCCCGGGGACATAGAAGAGCAACTGACCGAGGAATTGATCGACGGCATGCAGCAATTGATCTTC
GGCAATGGAGGGGCAGGGCA

Downstream 100 bases:

>100_bases
GGTTCGGGACGGCGGCGACGCTGTTTGGCCTGAAGGCCAAAGACGCCCCGCCCGCCGTCCCGTGGGGATACGCTCTGCGG
CACATGTTATGCGACCGGGC

Product: lytic transglycosylase

Products: NA

Alternate protein names: Lytic Murein Transglycosylase; Transglycosylase; Transglycosylase Protein; Transglycosylase SLT Domain Protein; Transmembrane Protein; Transglycosylase Slt Family; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing Protein; Soluble Lytic Murein Transglycosylase

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKVIGLVAICALLAGCGGGILGIGGGAEPVQVQQGLYPGETPEMRALVVEYATRHGIPEALLHRVIQRESDYRADARNGP
YYGLMQILPQTAGTMGFTGAPNDLLDARTNLEYAGRYLRGAWLVSDGDIDEAVGWYARGYYYEARDRCLLVETGLREREV
NRACG

Sequences:

>Translated_165_residues
MKVIGLVAICALLAGCGGGILGIGGGAEPVQVQQGLYPGETPEMRALVVEYATRHGIPEALLHRVIQRESDYRADARNGP
YYGLMQILPQTAGTMGFTGAPNDLLDARTNLEYAGRYLRGAWLVSDGDIDEAVGWYARGYYYEARDRCLLVETGLREREV
NRACG
>Mature_165_residues
MKVIGLVAICALLAGCGGGILGIGGGAEPVQVQQGLYPGETPEMRALVVEYATRHGIPEALLHRVIQRESDYRADARNGP
YYGLMQILPQTAGTMGFTGAPNDLLDARTNLEYAGRYLRGAWLVSDGDIDEAVGWYARGYYYEARDRCLLVETGLREREV
NRACG

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17954; Mature: 17954

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIGLVAICALLAGCGGGILGIGGGAEPVQVQQGLYPGETPEMRALVVEYATRHGIPEA
CCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHH
LLHRVIQRESDYRADARNGPYYGLMQILPQTAGTMGFTGAPNDLLDARTNLEYAGRYLRG
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHC
AWLVSDGDIDEAVGWYARGYYYEARDRCLLVETGLREREVNRACG
EEEECCCCHHHHHHHHHHCEEECCCCCEEEEECCCHHHHHHHCCC
>Mature Secondary Structure
MKVIGLVAICALLAGCGGGILGIGGGAEPVQVQQGLYPGETPEMRALVVEYATRHGIPEA
CCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHH
LLHRVIQRESDYRADARNGPYYGLMQILPQTAGTMGFTGAPNDLLDARTNLEYAGRYLRG
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHC
AWLVSDGDIDEAVGWYARGYYYEARDRCLLVETGLREREVNRACG
EEEECCCCHHHHHHHHHHCEEECCCCCEEEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA