Click here to switch to the map view.

The map label for this gene is pbp [H]

Identifier: 89053512

GI number: 89053512

Start: 973914

End: 974975

Strand: Direct

Name: pbp [H]

Synonym: Jann_1021

Alternate gene names: 89053512

Gene position: 973914-974975 (Clockwise)

Preceding gene: 89053508

Following gene: 89053518

Centisome position: 22.55

GC content: 65.63

Gene sequence:

>1062_bases
ATGGCTGTGACGGTTCGATTGTGTGTGGGGATGTTCGGTGTGCTGGTGGGGCTGGCGGCCCCAGTGTCCGCACAAATGTC
GCCCCAGGACGTGGCCGATGGCTTGTCAGAGCTTGCCTCGGTGCCAGCCGCGACGGCGGGCCGTGTCACGGAGCATGACC
TGGAGGTTGCGGTGGCGGGCACACGGGTGCGCGACGGGGCCGATCTGGTCTTGGTCGACGATGCCTGGCATGTGGGATCG
CTGACGAAATCCATGACTGCGACGCTGGCGGCACGCTTGGTGGAGGCGGGGTTGATCACCTGGGACACGCCGGTTGGCGA
GATCCTGGGCGAGCGTATCCCCGACATGGATGAGGCATGGCGCGATACGCCGCTGCGCGCGTTTCTGACGCACCGGTCCG
GCATGGCCGCGAACCTGCCCGCGCGCTCGGCACGGCAATTGGGCGATGGTCCCCGCGCGCTCTACGTCACGGAAATGCTG
GCAGGTCCCCCGGACGCGACCGTAGGGGAGTTCAGCTATTCCAACGCAGGATATGTGATTGCCGGTGCCATGCTGGAAGA
TGTCGGCGACGCGCCTTGGGAGGAGCTGATGCAGACCCATGTCTTCACGCCCCTCGGCATGACCAGCGCGGGCTTCGGTC
CGCCGTTGGGCGAGGCGATCGAGGGCCACGCGACACGGCTGTTCGGCGGCATCCGACCGGTCGGGCAGGGGTTTGAGGCC
GACAATATCCCCGCCATGGGGCCTGCGGGGCGGGTGCATCTATCGGCTGAAGACATGCTGATCTACATGCGCACGCATCT
GGTGCGTGACGCTGGGTTCCTGAGCGCTGAGAGCTGGGATGTTCTGCACGCCCCGGTGGGCGAGGAGGCTTACGCCATGG
GTTGGGGTGTGGGGGAGGATGGGAGCCTTGTGCATTCAGGCTCCAACACATTGTGGTATGCGGTGGCCTTTCTGGACCCG
GAGGCCGGAGAGGCCGCGTTCGTGGCGGTGAATTCAGGCGATCTTGAGGATGTGGTGGAGCCTGTGGATACCGCGCTCAG
AGAGCTTCTGGGGGCATTGTAG

Upstream 100 bases:

>100_bases
CAGCTTGGCTATATGGTGCGGACGACCCGCGAATGGAAGACCTATTGTGAGGGTCCGCGCCGGTAAGGGCAAGGTGGGGT
GGCGTGATTTGCGAGGAGAT

Downstream 100 bases:

>100_bases
CGGGTTTTGCGGCCCGCGCCTCGCGCCAGGCCAGCAGCGCGGCACCGGCGATGATGATACCCGCGCCAAGCAGCGACAGC
CCGGTGGGCGTTACCCCGAA

Product: beta-lactamase

Products: NA

Alternate protein names: PBP-4 [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MAVTVRLCVGMFGVLVGLAAPVSAQMSPQDVADGLSELASVPAATAGRVTEHDLEVAVAGTRVRDGADLVLVDDAWHVGS
LTKSMTATLAARLVEAGLITWDTPVGEILGERIPDMDEAWRDTPLRAFLTHRSGMAANLPARSARQLGDGPRALYVTEML
AGPPDATVGEFSYSNAGYVIAGAMLEDVGDAPWEELMQTHVFTPLGMTSAGFGPPLGEAIEGHATRLFGGIRPVGQGFEA
DNIPAMGPAGRVHLSAEDMLIYMRTHLVRDAGFLSAESWDVLHAPVGEEAYAMGWGVGEDGSLVHSGSNTLWYAVAFLDP
EAGEAAFVAVNSGDLEDVVEPVDTALRELLGAL

Sequences:

>Translated_353_residues
MAVTVRLCVGMFGVLVGLAAPVSAQMSPQDVADGLSELASVPAATAGRVTEHDLEVAVAGTRVRDGADLVLVDDAWHVGS
LTKSMTATLAARLVEAGLITWDTPVGEILGERIPDMDEAWRDTPLRAFLTHRSGMAANLPARSARQLGDGPRALYVTEML
AGPPDATVGEFSYSNAGYVIAGAMLEDVGDAPWEELMQTHVFTPLGMTSAGFGPPLGEAIEGHATRLFGGIRPVGQGFEA
DNIPAMGPAGRVHLSAEDMLIYMRTHLVRDAGFLSAESWDVLHAPVGEEAYAMGWGVGEDGSLVHSGSNTLWYAVAFLDP
EAGEAAFVAVNSGDLEDVVEPVDTALRELLGAL
>Mature_352_residues
AVTVRLCVGMFGVLVGLAAPVSAQMSPQDVADGLSELASVPAATAGRVTEHDLEVAVAGTRVRDGADLVLVDDAWHVGSL
TKSMTATLAARLVEAGLITWDTPVGEILGERIPDMDEAWRDTPLRAFLTHRSGMAANLPARSARQLGDGPRALYVTEMLA
GPPDATVGEFSYSNAGYVIAGAMLEDVGDAPWEELMQTHVFTPLGMTSAGFGPPLGEAIEGHATRLFGGIRPVGQGFEAD
NIPAMGPAGRVHLSAEDMLIYMRTHLVRDAGFLSAESWDVLHAPVGEEAYAMGWGVGEDGSLVHSGSNTLWYAVAFLDPE
AGEAAFVAVNSGDLEDVVEPVDTALRELLGAL

Specific function: Involved in cell wall biosynthesis and may also act as a sensor of external penicillins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-lactamase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 37017; Mature: 36886

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTVRLCVGMFGVLVGLAAPVSAQMSPQDVADGLSELASVPAATAGRVTEHDLEVAVAG
CEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
TRVRDGADLVLVDDAWHVGSLTKSMTATLAARLVEAGLITWDTPVGEILGERIPDMDEAW
CEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCHHHHH
RDTPLRAFLTHRSGMAANLPARSARQLGDGPRALYVTEMLAGPPDATVGEFSYSNAGYVI
HCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEE
AGAMLEDVGDAPWEELMQTHVFTPLGMTSAGFGPPLGEAIEGHATRLFGGIRPVGQGFEA
EHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DNIPAMGPAGRVHLSAEDMLIYMRTHLVRDAGFLSAESWDVLHAPVGEEAYAMGWGVGED
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCCC
GSLVHSGSNTLWYAVAFLDPEAGEAAFVAVNSGDLEDVVEPVDTALRELLGAL
CCEEECCCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVTVRLCVGMFGVLVGLAAPVSAQMSPQDVADGLSELASVPAATAGRVTEHDLEVAVAG
EEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
TRVRDGADLVLVDDAWHVGSLTKSMTATLAARLVEAGLITWDTPVGEILGERIPDMDEAW
CEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCCCHHHHH
RDTPLRAFLTHRSGMAANLPARSARQLGDGPRALYVTEMLAGPPDATVGEFSYSNAGYVI
HCCCHHHHHHHCCCCCCCCCHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCEEE
AGAMLEDVGDAPWEELMQTHVFTPLGMTSAGFGPPLGEAIEGHATRLFGGIRPVGQGFEA
EHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
DNIPAMGPAGRVHLSAEDMLIYMRTHLVRDAGFLSAESWDVLHAPVGEEAYAMGWGVGED
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEECCCCCCC
GSLVHSGSNTLWYAVAFLDPEAGEAAFVAVNSGDLEDVVEPVDTALRELLGAL
CCEEECCCCEEEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8440253 [H]