Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yhjG [C]

Identifier: 89053507

GI number: 89053507

Start: 969681

End: 971651

Strand: Direct

Name: yhjG [C]

Synonym: Jann_1016

Alternate gene names: 89053507

Gene position: 969681-971651 (Clockwise)

Preceding gene: 89053505

Following gene: 89053508

Centisome position: 22.46

GC content: 67.68

Gene sequence:

>1971_bases
ATGCGGTGGATTTTTCGAGTGATCGGGGCGGTCATCGTCCTGTTTTTCTTGGCCTTGGGCACGGTGCTGCTGATCCCGGC
GGAGCGGATCGCGCAGGTGGCCAGCGACCGGATCACGGCGGCCACGGGCCGGACGGTGACCATCAGCGGTGAGGCGCGGC
CAACCCTATGGCCGGATCTGGGCATTGTCATCGAGGGTCTGCGCGTCGGCAACCCGGCCTGGGCGGGCCATGCGCCGATG
ATCGAGGCCGCGCGGGTCAATGTGGGCGTGGCGTGGAACGGGCTGCTGTCCGGCGATATCCGGGTGGAGCGCGCCGTGTT
TGAAGGTGCGCAGATCACGCTGGTGCGCGCCGCCGATGGCCTGACGTCGTGGGATATGGGGGGCGGCGGAGAGGAGGCCA
CCGGCGCGCCGGTCCAGATCGGGTTTGATGAGGCGGTGATCGTGGAGGCCCGCGTGCACTATCTGGATGAGGAGGCGGGG
GCCGATTGGGATGTCACACAGTTGAACGCGACAATGCGCCTGCCCGAGGCGGGCGGCGCGGTCGCGATTGAGGGAACCGC
GCAGGTCAACGGCGTGCCGCTGGAATTGGAGACCACAATTGATGGCGTCGCAGCCCTGTTGGCCGGGGAGGCCCGCCCAC
TGCAGGCCAACCTGCGCTGGCAGGGCGGGTCCGCCGCCTTTGACGGGGCGTTGGGATTGGACGCCACGGCGCAGGGGGCG
CTGGACCTGACGGCAGAAGATCTTGGGCCGCTGGTGGCGCTGACCGGCGGCGCGATGCCCGATCTGCCGCACGGTCTGGG
CCGGGACCGCATTGCCGTGACGGGCGATGTGCGTCTGGCGCAGGAGGGGTCTGTGCATTTGCGCGAGGGGGTTTTGCGGC
TGGATGAGACGGTGTTGAGCGTCGCGGCGGACCTTCTGCCAGGGGAGGATCGCCCGATGCTGCGGGGCACGGTCACGGGC
GGCGACATCGCGCTTCCGGGGCTTCTGGCGAGTGGCGACGACCGCACGGGCAGCGGGTGGCCGCGTGATATTATCGACGT
CTCGGGTCTGTTCCTGACCGATGCGGACCTGACGGTGCGGGCCGAGAGCCTTGATCTGGGTGCTGTGACCTTGAGCGAGA
TTGACCTGCGATCGACCCTGACGCGCGGGCGGCTGGTGTTCGATATCGCCTCCATCCGCACCTATGAGGGCCAGCTGGCG
GGGCAATTCGTAATCAATGGCCGGGGCGGGCTGTCGGTGGGTGGTGACCTGATCCTGGCCAATGTGGCGCTACAGCCATT
GCTGGGGGCGATGGCCGATTACGAGCGGTTGCAGGGCACAGGCTCGGCCTCCGTCGAGTTTCTTGGGGTCGGCAATGATC
TGCACACGATCATGGATGGGCTGGAGGCGGAGGGCGACATTGCCCTGGGTCAGGGGGCCATTCTGGGTCTGGACCTGGCG
GGCATGTTGCGGAATTTCGATGCGTCGTTTCAGGGCGAGGGCCAACGCACGGTCTATGACCGGGTGACGGCGGAGTTCCT
GGTGCGCGACGGGGTTGTGTTGAACGAAGACCTGTTGCTGGACGCGCCCTGGGGAGAGGTGCGCGGCGCGGGAGAGGCGG
ATCTGGCGGCCATGAGTGTCGACTATACGCTGGTGCCGGGTGTGTTCCGGGACGCCGACGGGGTGGCGGGCCTGCGGGTG
CCGATTGCCATCACCGGGTCCTGGTCCGCGCCCCGAATCGCGCCGGATCTGGCGCTGCTGGCGGAATACGAACTGGCCGA
GGAACGGGAGCGGCTGGAGGCCGAGGCCCGCGCGGCGTTCGAGGCGGAGGAGGACCGTCTGGAAGAGCTGGCACGCGCCC
GCGCGAACGAGGTTCTGGGCACGGATATTCAGGCGGGCGACACGCCCGGGGACATAGAAGAGCAACTGACCGAGGAATTG
ATCGACGGCATGCAGCAATTGATCTTCGGCAATGGAGGGGCAGGGCAATGA

Upstream 100 bases:

>100_bases
TTGGATAAGCAAACCCTTGCCGCCATCGCAAGATTTTGGATTTGCGGCGGCGGGCGCCCGCGTTAGTCTGGCCCCATTGA
GGACGAAAGGCGCGAGCGAC

Downstream 100 bases:

>100_bases
AGGTGATCGGTCTGGTGGCGATATGCGCCCTGCTGGCGGGGTGCGGCGGCGGGATTTTGGGGATCGGCGGTGGGGCGGAA
CCGGTGCAGGTGCAGCAGGG

Product: AsmA

Products: NA

Alternate protein names: AsmA Protein; AsmA Family; AsmA-Like Protein; AsmA Protein Assembly Of Outer Membrane Proteins; Outer Membrane Protein Assembly Protein AsmA; Protein Involved In Assembly Of Outer Membrane Proteins; AsmA Family Membrane Protein

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM
IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG
ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA
LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG
GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA
GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA
GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV
PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL
IDGMQQLIFGNGGAGQ

Sequences:

>Translated_656_residues
MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM
IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG
ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA
LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG
GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA
GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA
GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV
PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL
IDGMQQLIFGNGGAGQ
>Mature_656_residues
MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM
IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG
ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA
LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG
GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA
GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA
GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV
PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL
IDGMQQLIFGNGGAGQ

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68699; Mature: 68699

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDL
CHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCC
GIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADG
CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEECCCEEEEEEHHCCCEEEEEEECCC
LTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGGA
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCEEEECEEEECCCCCCE
VAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA
EEEECCCEECCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLS
EEECHHHHCCEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHH
VAADLLPGEDRPMLRGTVTGGDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVR
HHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCCCCCCCHHHHHCCCEEEECCCEEEE
AESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLAGQFVINGRGGLSVGGDLILA
EECCCCCEEEHHHHHHHHHHHCCEEEEEEEHHEEECCCEEEEEEEECCCCCCCCCHHEEH
NVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEEEHH
GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCHHHCCCCCCCEEEEEE
DYTLVPGVFRDADGVAGLRVPIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAF
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEELIDGMQQLIFGNGGAGQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDL
CHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCC
GIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADG
CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEECCCEEEEEEHHCCCEEEEEEECCC
LTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGGA
CCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCEEEECEEEECCCCCCE
VAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA
EEEECCCEECCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLS
EEECHHHHCCEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHH
VAADLLPGEDRPMLRGTVTGGDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVR
HHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCCCCCCCHHHHHCCCEEEECCCEEEE
AESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLAGQFVINGRGGLSVGGDLILA
EECCCCCEEEHHHHHHHHHHHCCEEEEEEEHHEEECCCEEEEEEEECCCCCCCCCHHEEH
NVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA
HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEEEHH
GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSV
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCHHHCCCCCCCEEEEEE
DYTLVPGVFRDADGVAGLRVPIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAF
CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEELIDGMQQLIFGNGGAGQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA