Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yhjG [C]
Identifier: 89053507
GI number: 89053507
Start: 969681
End: 971651
Strand: Direct
Name: yhjG [C]
Synonym: Jann_1016
Alternate gene names: 89053507
Gene position: 969681-971651 (Clockwise)
Preceding gene: 89053505
Following gene: 89053508
Centisome position: 22.46
GC content: 67.68
Gene sequence:
>1971_bases ATGCGGTGGATTTTTCGAGTGATCGGGGCGGTCATCGTCCTGTTTTTCTTGGCCTTGGGCACGGTGCTGCTGATCCCGGC GGAGCGGATCGCGCAGGTGGCCAGCGACCGGATCACGGCGGCCACGGGCCGGACGGTGACCATCAGCGGTGAGGCGCGGC CAACCCTATGGCCGGATCTGGGCATTGTCATCGAGGGTCTGCGCGTCGGCAACCCGGCCTGGGCGGGCCATGCGCCGATG ATCGAGGCCGCGCGGGTCAATGTGGGCGTGGCGTGGAACGGGCTGCTGTCCGGCGATATCCGGGTGGAGCGCGCCGTGTT TGAAGGTGCGCAGATCACGCTGGTGCGCGCCGCCGATGGCCTGACGTCGTGGGATATGGGGGGCGGCGGAGAGGAGGCCA CCGGCGCGCCGGTCCAGATCGGGTTTGATGAGGCGGTGATCGTGGAGGCCCGCGTGCACTATCTGGATGAGGAGGCGGGG GCCGATTGGGATGTCACACAGTTGAACGCGACAATGCGCCTGCCCGAGGCGGGCGGCGCGGTCGCGATTGAGGGAACCGC GCAGGTCAACGGCGTGCCGCTGGAATTGGAGACCACAATTGATGGCGTCGCAGCCCTGTTGGCCGGGGAGGCCCGCCCAC TGCAGGCCAACCTGCGCTGGCAGGGCGGGTCCGCCGCCTTTGACGGGGCGTTGGGATTGGACGCCACGGCGCAGGGGGCG CTGGACCTGACGGCAGAAGATCTTGGGCCGCTGGTGGCGCTGACCGGCGGCGCGATGCCCGATCTGCCGCACGGTCTGGG CCGGGACCGCATTGCCGTGACGGGCGATGTGCGTCTGGCGCAGGAGGGGTCTGTGCATTTGCGCGAGGGGGTTTTGCGGC TGGATGAGACGGTGTTGAGCGTCGCGGCGGACCTTCTGCCAGGGGAGGATCGCCCGATGCTGCGGGGCACGGTCACGGGC GGCGACATCGCGCTTCCGGGGCTTCTGGCGAGTGGCGACGACCGCACGGGCAGCGGGTGGCCGCGTGATATTATCGACGT CTCGGGTCTGTTCCTGACCGATGCGGACCTGACGGTGCGGGCCGAGAGCCTTGATCTGGGTGCTGTGACCTTGAGCGAGA TTGACCTGCGATCGACCCTGACGCGCGGGCGGCTGGTGTTCGATATCGCCTCCATCCGCACCTATGAGGGCCAGCTGGCG GGGCAATTCGTAATCAATGGCCGGGGCGGGCTGTCGGTGGGTGGTGACCTGATCCTGGCCAATGTGGCGCTACAGCCATT GCTGGGGGCGATGGCCGATTACGAGCGGTTGCAGGGCACAGGCTCGGCCTCCGTCGAGTTTCTTGGGGTCGGCAATGATC TGCACACGATCATGGATGGGCTGGAGGCGGAGGGCGACATTGCCCTGGGTCAGGGGGCCATTCTGGGTCTGGACCTGGCG GGCATGTTGCGGAATTTCGATGCGTCGTTTCAGGGCGAGGGCCAACGCACGGTCTATGACCGGGTGACGGCGGAGTTCCT GGTGCGCGACGGGGTTGTGTTGAACGAAGACCTGTTGCTGGACGCGCCCTGGGGAGAGGTGCGCGGCGCGGGAGAGGCGG ATCTGGCGGCCATGAGTGTCGACTATACGCTGGTGCCGGGTGTGTTCCGGGACGCCGACGGGGTGGCGGGCCTGCGGGTG CCGATTGCCATCACCGGGTCCTGGTCCGCGCCCCGAATCGCGCCGGATCTGGCGCTGCTGGCGGAATACGAACTGGCCGA GGAACGGGAGCGGCTGGAGGCCGAGGCCCGCGCGGCGTTCGAGGCGGAGGAGGACCGTCTGGAAGAGCTGGCACGCGCCC GCGCGAACGAGGTTCTGGGCACGGATATTCAGGCGGGCGACACGCCCGGGGACATAGAAGAGCAACTGACCGAGGAATTG ATCGACGGCATGCAGCAATTGATCTTCGGCAATGGAGGGGCAGGGCAATGA
Upstream 100 bases:
>100_bases TTGGATAAGCAAACCCTTGCCGCCATCGCAAGATTTTGGATTTGCGGCGGCGGGCGCCCGCGTTAGTCTGGCCCCATTGA GGACGAAAGGCGCGAGCGAC
Downstream 100 bases:
>100_bases AGGTGATCGGTCTGGTGGCGATATGCGCCCTGCTGGCGGGGTGCGGCGGCGGGATTTTGGGGATCGGCGGTGGGGCGGAA CCGGTGCAGGTGCAGCAGGG
Product: AsmA
Products: NA
Alternate protein names: AsmA Protein; AsmA Family; AsmA-Like Protein; AsmA Protein Assembly Of Outer Membrane Proteins; Outer Membrane Protein Assembly Protein AsmA; Protein Involved In Assembly Of Outer Membrane Proteins; AsmA Family Membrane Protein
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL IDGMQQLIFGNGGAGQ
Sequences:
>Translated_656_residues MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL IDGMQQLIFGNGGAGQ >Mature_656_residues MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDLGIVIEGLRVGNPAWAGHAPM IEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADGLTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAG ADWDVTQLNATMRLPEAGGAVAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLSVAADLLPGEDRPMLRGTVTG GDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVRAESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLA GQFVINGRGGLSVGGDLILANVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSVDYTLVPGVFRDADGVAGLRV PIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAFEAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEEL IDGMQQLIFGNGGAGQ
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68699; Mature: 68699
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDL CHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCC GIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADG CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEECCCEEEEEEHHCCCEEEEEEECCC LTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGGA CCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCEEEECEEEECCCCCCE VAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA EEEECCCEECCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLS EEECHHHHCCEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHH VAADLLPGEDRPMLRGTVTGGDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVR HHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCCCCCCCHHHHHCCCEEEECCCEEEE AESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLAGQFVINGRGGLSVGGDLILA EECCCCCEEEHHHHHHHHHHHCCEEEEEEEHHEEECCCEEEEEEEECCCCCCCCCHHEEH NVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEEEHH GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCHHHCCCCCCCEEEEEE DYTLVPGVFRDADGVAGLRVPIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAF CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEELIDGMQQLIFGNGGAGQ CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRWIFRVIGAVIVLFFLALGTVLLIPAERIAQVASDRITAATGRTVTISGEARPTLWPDL CHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHCCEEEECCCEEEECCCCCCCCCCCC GIVIEGLRVGNPAWAGHAPMIEAARVNVGVAWNGLLSGDIRVERAVFEGAQITLVRAADG CCEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCEECCCEEEEEEHHCCCEEEEEEECCC LTSWDMGGGGEEATGAPVQIGFDEAVIVEARVHYLDEEAGADWDVTQLNATMRLPEAGGA CCCCCCCCCCCCCCCCCEEECCCCEEEEEEHHHHHHHHCCCCCCEEEECEEEECCCCCCE VAIEGTAQVNGVPLELETTIDGVAALLAGEARPLQANLRWQGGSAAFDGALGLDATAQGA EEEECCCEECCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC LDLTAEDLGPLVALTGGAMPDLPHGLGRDRIAVTGDVRLAQEGSVHLREGVLRLDETVLS EEECHHHHCCEEEECCCCCCCCCCCCCCCCEEEEECEEEECCCCCHHHHHHHHHHHHHHH VAADLLPGEDRPMLRGTVTGGDIALPGLLASGDDRTGSGWPRDIIDVSGLFLTDADLTVR HHHHHCCCCCCCCEEEEECCCCEECCCEEECCCCCCCCCCCHHHHHCCCEEEECCCEEEE AESLDLGAVTLSEIDLRSTLTRGRLVFDIASIRTYEGQLAGQFVINGRGGLSVGGDLILA EECCCCCEEEHHHHHHHHHHHCCEEEEEEEHHEEECCCEEEEEEEECCCCCCCCCHHEEH NVALQPLLGAMADYERLQGTGSASVEFLGVGNDLHTIMDGLEAEGDIALGQGAILGLDLA HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHCCCCCCCEEECCCCEEEEEHH GMLRNFDASFQGEGQRTVYDRVTAEFLVRDGVVLNEDLLLDAPWGEVRGAGEADLAAMSV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEECCCEEEECCCHHHCCCCCCCEEEEEE DYTLVPGVFRDADGVAGLRVPIAITGSWSAPRIAPDLALLAEYELAEERERLEAEARAAF CEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EAEEDRLEELARARANEVLGTDIQAGDTPGDIEEQLTEELIDGMQQLIFGNGGAGQ CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA