Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053459
Identifier: 89053459
GI number: 89053459
Start: 925367
End: 926020
Strand: Direct
Name: 89053459
Synonym: Jann_0968
Alternate gene names: NA
Gene position: 925367-926020 (Clockwise)
Preceding gene: 89053458
Following gene: 89053460
Centisome position: 21.43
GC content: 63.91
Gene sequence:
>654_bases ATGACCGAAAACGCCACTCCCCTGGTCGATCCCGCCAAGATCGAGGCGCTGTTCACCCGCGCCGACGGGCAGTTCCTGTT CGCCCGATGGGGGCGGCCCATCGTGCCGGTTGTGTTCGGGGTGGAGGACAGCACGATCAGCGTCTTCAAAGGCGCGATTG AGGCTGTAGTTGCGCTGGCCGATCACAAGATGGCGGAGCATGACCCGGAGCTTGGCGCAAACCTGATGGTGTTTTTCATC CGTGACTGGGCGGAGCTGACCGCGACGCCGAACCTTGACCGTCTGATCCCGGATCTGGCCCCGCTCGTGGCGCGGCTGGA GAGCGCGCAAGCCAACCAATACCGCAGTTTCCGCTTTGACGAGGATGGTGGCATCAAGGCCGCATTCGTTTTCATCCGCA TGGATGACGCGATGGCAGAGGCCTCGGCAGAGACCATCGCGCTGAGCCAGATCGTGCAGACGATCGTGTTGTGGAGCGAT ACGGCCTTCCTCGGAACCTCACCGCTCGCGGTCCTGACGGATGACGGACCGGCTGTCCTGAAACCGGACATCGCCGAGGT GATCCGCGCGGCCTATGACCCGGTTCTGCCGGTCGCGGCGACGGATGCGTCCCACGCCTTGCGCCTGTTTGCACGGATCG GCGTGCCGCAATGA
Upstream 100 bases:
>100_bases AGCCCATACAGGTTCAGGAGTTCGGCCTGACCTCGGACCCGGTGATCGCCACTGCGATTGCCGAGCAGCGGCAGTAGCAG AGGCGCATAGCGAGGATGCC
Downstream 100 bases:
>100_bases CCCACCTCTGGCCCCTGCGCGTCTACTATGAAGACGTCGATCTGGCGGGGATCGTCTACTACGCCAACTACCTGAAATAC CTGGAGCGGGGGCGCTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFI RDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSD TAFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ
Sequences:
>Translated_217_residues MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFI RDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSD TAFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ >Mature_216_residues TENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALADHKMAEHDPELGANLMVFFIR DWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFDEDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDT AFLGTSPLAVLTDDGPAVLKPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23504; Mature: 23373
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALA CCCCCCCCCCHHHHEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH DHKMAEHDPELGANLMVFFIRDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFD HHHHHHCCCCCCCCEEEHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEC EDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDTAFLGTSPLAVLTDDGPAVL CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE KPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ CCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCC >Mature Secondary Structure TENATPLVDPAKIEALFTRADGQFLFARWGRPIVPVVFGVEDSTISVFKGAIEAVVALA CCCCCCCCCHHHHEEEEEECCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHH DHKMAEHDPELGANLMVFFIRDWAELTATPNLDRLIPDLAPLVARLESAQANQYRSFRFD HHHHHHCCCCCCCCEEEHEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEC EDGGIKAAFVFIRMDDAMAEASAETIALSQIVQTIVLWSDTAFLGTSPLAVLTDDGPAVL CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEE KPDIAEVIRAAYDPVLPVAATDASHALRLFARIGVPQ CCCHHHHHHHHCCCCCCEEECCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA