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The map label for this gene is ybgC [H]

Identifier: 89053460

GI number: 89053460

Start: 926017

End: 926427

Strand: Direct

Name: ybgC [H]

Synonym: Jann_0969

Alternate gene names: 89053460

Gene position: 926017-926427 (Clockwise)

Preceding gene: 89053459

Following gene: 89053461

Centisome position: 21.45

GC content: 62.77

Gene sequence:

>411_bases
ATGACCCACCTCTGGCCCCTGCGCGTCTACTATGAAGACGTCGATCTGGCGGGGATCGTCTACTACGCCAACTACCTGAA
ATACCTGGAGCGGGGGCGCTCTGAAATGGTGCGTGAGGCCGGCATTTCCCAGCTCGACATGAAAGCTGCGGGGCTGGTCT
TTGCCGTGCGGCGGGTGGAGGCGGAATACCTCAAACCCGCCAAATACGATGATGAGCTGGTCGTGGAGACGCAGCTGGAC
CGCCTGAAAGGGGCCAGTTTCGACATGCCCCAGCGGGTCCTGCGCGGCGATGACGTGCTGCTGGACGCGCGGATCAAGGT
TGTGATCCTCAACGCGGACGGCCGGGCGGCGCGACTTCCGGCGGATATTCGCGCAAAAGTCACAGCCGTCGCGGCAAGTG
ATGGCCCGTAA

Upstream 100 bases:

>100_bases
TCGCCGAGGTGATCCGCGCGGCCTATGACCCGGTTCTGCCGGTCGCGGCGACGGATGCGTCCCACGCCTTGCGCCTGTTT
GCACGGATCGGCGTGCCGCA

Downstream 100 bases:

>100_bases
CACGGAAGTGTTCGCCAACAGGCTTCCCTCCTGCTAGACTAAGGCACAAATGAGGCGCGAAAACAGCGCCCACGCGTAGA
CATACGGTGTTGAGGCCGGG

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTHLWPLRVYYEDVDLAGIVYYANYLKYLERGRSEMVREAGISQLDMKAAGLVFAVRRVEAEYLKPAKYDDELVVETQLD
RLKGASFDMPQRVLRGDDVLLDARIKVVILNADGRAARLPADIRAKVTAVAASDGP

Sequences:

>Translated_136_residues
MTHLWPLRVYYEDVDLAGIVYYANYLKYLERGRSEMVREAGISQLDMKAAGLVFAVRRVEAEYLKPAKYDDELVVETQLD
RLKGASFDMPQRVLRGDDVLLDARIKVVILNADGRAARLPADIRAKVTAVAASDGP
>Mature_135_residues
THLWPLRVYYEDVDLAGIVYYANYLKYLERGRSEMVREAGISQLDMKAAGLVFAVRRVEAEYLKPAKYDDELVVETQLDR
LKGASFDMPQRVLRGDDVLLDARIKVVILNADGRAARLPADIRAKVTAVAASDGP

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=124, Percent_Identity=38.7096774193548, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15272; Mature: 15141

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHLWPLRVYYEDVDLAGIVYYANYLKYLERGRSEMVREAGISQLDMKAAGLVFAVRRVE
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AEYLKPAKYDDELVVETQLDRLKGASFDMPQRVLRGDDVLLDARIKVVILNADGRAARLP
HHHCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEEEECEEEEEEECCCCCCEECC
ADIRAKVTAVAASDGP
CCHHEEEEEEECCCCC
>Mature Secondary Structure 
THLWPLRVYYEDVDLAGIVYYANYLKYLERGRSEMVREAGISQLDMKAAGLVFAVRRVE
CCEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
AEYLKPAKYDDELVVETQLDRLKGASFDMPQRVLRGDDVLLDARIKVVILNADGRAARLP
HHHCCCCCCCCCEEEEEHHHHHCCCCCCCHHHHHCCCCEEEECEEEEEEECCCCCCEECC
ADIRAKVTAVAASDGP
CCHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]