Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053458
Identifier: 89053458
GI number: 89053458
Start: 924087
End: 925343
Strand: Direct
Name: 89053458
Synonym: Jann_0967
Alternate gene names: NA
Gene position: 924087-925343 (Clockwise)
Preceding gene: 89053457
Following gene: 89053459
Centisome position: 21.4
GC content: 63.64
Gene sequence:
>1257_bases ATGAGATTTGGGTTTGCGTTGGTTTTTGCGTTGTGGACGACAGCCGCTGCAGCGCAGGTCCCGTTCGGGCGCGAGGATGT CGTTGAGACGCGCTTCGGCAGCCTGCAAGTGGTCGGTGGTGAGGTGGATAACTTTATCAGTTTTGGAGGTCTCTCCTACG ATCAGCTGTACGGCACACGGAACCAGATCCTTGCCGTCGCCGGGTTGGCGGATGCTGAGGTGGATTGGGCGCTGATCGAG GCCCCGCAAAGCCACGGCCAATGCGACCGCATTCACCGGCTGCTGGCCATCACCCCGCGCGGGATGAGCTACAGCGCGCC GTTTGGGCCGTGCAACGGCCAGCCCGTCGACATGCAGATTGCGCCGGGGCAGGTGCAGGTCACACTGACCGGCGATGGTG GTGTGAGCGGCACCTATACGTTTAACGGGCAGGAGCTTCATGAAGGTCCCTTCGCCACCGCGCCCGCGCCGCTTGAGGTT GTGCCCACACGCTTTGCACAGTCGCCCAACGTCACCACCCGGTTCGGGCGGATGTGGGTGCAGCAAGGGGGCAACCGGCA GCAAACGCTGGTGCATGACGGCACGCCGATATCCCTTGGTCCGGCGGAATTTTACTGGTTTCGCGGCGTTTATGAAGGGG AGGGAAGCGATTATGTCATCGCGTCCTCCAACCACAGCGGCAACATGTGCGGCGGCTATGGCGAGTGGTTCCTGATGCGC GTCAGCGCGGACGGTGTGTCGGTGGCCCCGCCGCTGGATGCCTGCGCCAACATTGCTAACGTGCGCGTGGTGGAGGGTGC CTTGCAGTTTGAGATGAGCCACGCCGACCTGACCATCAGCCACGAGGCATTCCGCTGGGACGGCGCGTCAATGACGTCTG AGCTGGTTCCTGAACCTGCCGCCGCGCCCGCCGGAGCCGGAGAGGACGTTGCACGTTGGATCGGCCGGTATACCTACGAG GTTTTTGCGGATGCCTCCGAGCGCGCGCGGCTTGTTCAGATCATGTCACAGGACCAGATGCAGCAGCTGGCAACGGCCAT GAGTTTCGGGGCCCGGATCGAGGAGAGGACCGGCTGGGTTCTTGCCCAAAGCTGTCAGCAACATAATTGCGGGTTCAACC GGGGGCTCTGGGCCGTCCGAATCGCCGACGGGGCCGTGGCTGCCGCGATGCTGCAGGGGGAGCCCATACAGGTTCAGGAG TTCGGCCTGACCTCGGACCCGGTGATCGCCACTGCGATTGCCGAGCAGCGGCAGTAG
Upstream 100 bases:
>100_bases GCCTTATCGCACGCACGCCGCGCGGGCGGATGTTGGCGCATAAGGGATGGACGCATCTGGGGATGGCCCCACCGAAGCGT CCGGATCAGGGGGAGCTGAT
Downstream 100 bases:
>100_bases CAGAGGCGCATAGCGAGGATGCCATGACCGAAAACGCCACTCCCCTGGTCGATCCCGCCAAGATCGAGGCGCTGTTCACC CGCGCCGACGGGCAGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MRFGFALVFALWTTAAAAQVPFGREDVVETRFGSLQVVGGEVDNFISFGGLSYDQLYGTRNQILAVAGLADAEVDWALIE APQSHGQCDRIHRLLAITPRGMSYSAPFGPCNGQPVDMQIAPGQVQVTLTGDGGVSGTYTFNGQELHEGPFATAPAPLEV VPTRFAQSPNVTTRFGRMWVQQGGNRQQTLVHDGTPISLGPAEFYWFRGVYEGEGSDYVIASSNHSGNMCGGYGEWFLMR VSADGVSVAPPLDACANIANVRVVEGALQFEMSHADLTISHEAFRWDGASMTSELVPEPAAAPAGAGEDVARWIGRYTYE VFADASERARLVQIMSQDQMQQLATAMSFGARIEERTGWVLAQSCQQHNCGFNRGLWAVRIADGAVAAAMLQGEPIQVQE FGLTSDPVIATAIAEQRQ
Sequences:
>Translated_418_residues MRFGFALVFALWTTAAAAQVPFGREDVVETRFGSLQVVGGEVDNFISFGGLSYDQLYGTRNQILAVAGLADAEVDWALIE APQSHGQCDRIHRLLAITPRGMSYSAPFGPCNGQPVDMQIAPGQVQVTLTGDGGVSGTYTFNGQELHEGPFATAPAPLEV VPTRFAQSPNVTTRFGRMWVQQGGNRQQTLVHDGTPISLGPAEFYWFRGVYEGEGSDYVIASSNHSGNMCGGYGEWFLMR VSADGVSVAPPLDACANIANVRVVEGALQFEMSHADLTISHEAFRWDGASMTSELVPEPAAAPAGAGEDVARWIGRYTYE VFADASERARLVQIMSQDQMQQLATAMSFGARIEERTGWVLAQSCQQHNCGFNRGLWAVRIADGAVAAAMLQGEPIQVQE FGLTSDPVIATAIAEQRQ >Mature_418_residues MRFGFALVFALWTTAAAAQVPFGREDVVETRFGSLQVVGGEVDNFISFGGLSYDQLYGTRNQILAVAGLADAEVDWALIE APQSHGQCDRIHRLLAITPRGMSYSAPFGPCNGQPVDMQIAPGQVQVTLTGDGGVSGTYTFNGQELHEGPFATAPAPLEV VPTRFAQSPNVTTRFGRMWVQQGGNRQQTLVHDGTPISLGPAEFYWFRGVYEGEGSDYVIASSNHSGNMCGGYGEWFLMR VSADGVSVAPPLDACANIANVRVVEGALQFEMSHADLTISHEAFRWDGASMTSELVPEPAAAPAGAGEDVARWIGRYTYE VFADASERARLVQIMSQDQMQQLATAMSFGARIEERTGWVLAQSCQQHNCGFNRGLWAVRIADGAVAAAMLQGEPIQVQE FGLTSDPVIATAIAEQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45036; Mature: 45036
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGFALVFALWTTAAAAQVPFGREDVVETRFGSLQVVGGEVDNFISFGGLSYDQLYGTR CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHCCCC NQILAVAGLADAEVDWALIEAPQSHGQCDRIHRLLAITPRGMSYSAPFGPCNGQPVDMQI CCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEE APGQVQVTLTGDGGVSGTYTFNGQELHEGPFATAPAPLEVVPTRFAQSPNVTTRFGRMWV CCCEEEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCEEECHHHCCCCCCHHHHHHHHH QQGGNRQQTLVHDGTPISLGPAEFYWFRGVYEGEGSDYVIASSNHSGNMCGGYGEWFLMR HCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEE VSADGVSVAPPLDACANIANVRVVEGALQFEMSHADLTISHEAFRWDGASMTSELVPEPA EECCCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCEEEECHHEEECCCCHHHHHCCCCC AAPAGAGEDVARWIGRYTYEVFADASERARLVQIMSQDQMQQLATAMSFGARIEERTGWV CCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHH LAQSCQQHNCGFNRGLWAVRIADGAVAAAMLQGEPIQVQEFGLTSDPVIATAIAEQRQ HHHHHHHCCCCCCCCEEEEEEECCCEEEHHHCCCCEEEEECCCCCCCCCEEHHHHCCC >Mature Secondary Structure MRFGFALVFALWTTAAAAQVPFGREDVVETRFGSLQVVGGEVDNFISFGGLSYDQLYGTR CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCHHHHHHHCCCCHHHHCCCC NQILAVAGLADAEVDWALIEAPQSHGQCDRIHRLLAITPRGMSYSAPFGPCNGQPVDMQI CCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEE APGQVQVTLTGDGGVSGTYTFNGQELHEGPFATAPAPLEVVPTRFAQSPNVTTRFGRMWV CCCEEEEEEECCCCCCEEEEECCCEECCCCCCCCCCCCEEECHHHCCCCCCHHHHHHHHH QQGGNRQQTLVHDGTPISLGPAEFYWFRGVYEGEGSDYVIASSNHSGNMCGGYGEWFLMR HCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEE VSADGVSVAPPLDACANIANVRVVEGALQFEMSHADLTISHEAFRWDGASMTSELVPEPA EECCCCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCEEEECHHEEECCCCHHHHHCCCCC AAPAGAGEDVARWIGRYTYEVFADASERARLVQIMSQDQMQQLATAMSFGARIEERTGWV CCCCCCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHH LAQSCQQHNCGFNRGLWAVRIADGAVAAAMLQGEPIQVQEFGLTSDPVIATAIAEQRQ HHHHHHHCCCCCCCCEEEEEEECCCEEEHHHCCCCEEEEECCCCCCCCCEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA