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The map label for this gene is siaT [H]

Identifier: 89053363

GI number: 89053363

Start: 827859

End: 829175

Strand: Direct

Name: siaT [H]

Synonym: Jann_0872

Alternate gene names: 89053363

Gene position: 827859-829175 (Clockwise)

Preceding gene: 89053362

Following gene: 89053364

Centisome position: 19.17

GC content: 63.1

Gene sequence:

>1317_bases
ATGAGTTTTGAGCTGACCGTGGGCTTCGGCTCCGTCTTTCTGATGGTTGCGCTGATCTGGCTTGGACTGCACGTGGCCGT
CGCGCTGGCTGCGGCAAGCTTTCTGGGCGTCTGGCTGATCCGTGGCGATGTGGAGCTTGCGGCGCGCCTTCTTGGACTTG
CTGCCGAGGACAGCATCGCGTCCTACGTGTTTGGCGTGATCCCGTTGTTCGTGCTGATGGGATTACTGGTGGAACGCGCC
GGTGTGGGCCGCGATGCCTTTGACGTGGGCGAAAGCGCGTTTCGGCGCATCAAGGGCGGGCTTGGTGTTGCTACGGTCGG
AGCCAATGCGATCTTTGCGGCGATCACCGGCGTCTCCATCGCGTCGGCGGCGGTGTTCACCAAGGTGGCCGTGCCGCAGA
TGATCGACCGGGGCTATAACCCGCGCTTCGCTGTTGGGGTCGTGGCGGGATCCTCGGTTCTGGGCATGCTGATCCCGCCG
TCGCTTCTGCTCATCATCTATGGTGTGCTGGTCGAGGTTTCCATCGGCGATCTGTTCCTTGCGGGGATCCTTCCGGGGCT
GTTGCTCGCGGTTCTCTATGCCATCGGCATCCTTGTCATGGCGCGCAAAACGCCCGGCTTTGTGGGCACACCTCCGGCGG
AGGATGATGGGCGCCCCGGCCTTGGCTGGCCCACAATCTGCGCCAAACTCTTCCCCATCGTCCTGCTGATCGGGGCCGTG
TTCGGCGGGCTCTACGGCGGCTGGTTTACCCCGACAGAGGCCGGCGCGGTCGGCGCATTCCTCGCCCTGCTCGTCGCCCT
CGCCCGCCGTAGCCTGACCCCCGCACGCCTGTGGGAGGTGCTGAAGGAAACCGGCCACGTCACGGCTTCCATCTGCATCC
TGTTCGTGGCGGCGACGATGTATTCGCGCATGCTGGCGCTGTCGGGCTTTCCCAACGCCTTGGGCGATTGGCTGACCGCG
TCGCAGTTCGGCCTGACCGGCATCATCATCGCCTATGTCGCGCTGATCCTGATCCTTGGCTCGATCCTGGACAGCACGTC
CATCATGCTGATCACCGTGCCTCTCTTCGCGGGGCCCATCGTGGCGCTTGGCGCGGATCTGATCTGGTTCGGCATCATCA
CCATTATTGCGGTCGAGATCGGATTGCTGACCCCGCCCCTGGGAATATCGGCCTTTGTGGTGAAGGCCAATCTTCAGGAC
GACCGCATCGGCCTGAAGGATATTTTCCTCGGCGCCGCCCCCTTCGCAGGTATCATGCTGATCTGTCTGATCCTCGTCAT
TGTCTTCCCGGCCCTGTCACTGGCCCTTATCCGATAG

Upstream 100 bases:

>100_bases
TTACGTTTCCAATCTGGCCGATCTCTCTGATCATCGTGTTGGGGGCCTGCCTCGTGGCGCTGGAATATGCGCTGATGGCC
TTGAAAGAGGTATTGAGTAG

Downstream 100 bases:

>100_bases
GAGCTTTCCATGCCCGATCCCTATTACGCCTCTGTCGATGATCTGAAACAGGAGCTGGTCCACGGTTTCCGCGCCATGGC
ACTGAACGATCTGGGCCTTG

Product: TRAP C4-dicarboxylate transport system permease DctM

Products: NA

Alternate protein names: N-acetylneuraminic acid permease; N-acetylneuraminic acid transporter; Neu5Ac permease [H]

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSFELTVGFGSVFLMVALIWLGLHVAVALAAASFLGVWLIRGDVELAARLLGLAAEDSIASYVFGVIPLFVLMGLLVERA
GVGRDAFDVGESAFRRIKGGLGVATVGANAIFAAITGVSIASAAVFTKVAVPQMIDRGYNPRFAVGVVAGSSVLGMLIPP
SLLLIIYGVLVEVSIGDLFLAGILPGLLLAVLYAIGILVMARKTPGFVGTPPAEDDGRPGLGWPTICAKLFPIVLLIGAV
FGGLYGGWFTPTEAGAVGAFLALLVALARRSLTPARLWEVLKETGHVTASICILFVAATMYSRMLALSGFPNALGDWLTA
SQFGLTGIIIAYVALILILGSILDSTSIMLITVPLFAGPIVALGADLIWFGIITIIAVEIGLLTPPLGISAFVVKANLQD
DRIGLKDIFLGAAPFAGIMLICLILVIVFPALSLALIR

Sequences:

>Translated_438_residues
MSFELTVGFGSVFLMVALIWLGLHVAVALAAASFLGVWLIRGDVELAARLLGLAAEDSIASYVFGVIPLFVLMGLLVERA
GVGRDAFDVGESAFRRIKGGLGVATVGANAIFAAITGVSIASAAVFTKVAVPQMIDRGYNPRFAVGVVAGSSVLGMLIPP
SLLLIIYGVLVEVSIGDLFLAGILPGLLLAVLYAIGILVMARKTPGFVGTPPAEDDGRPGLGWPTICAKLFPIVLLIGAV
FGGLYGGWFTPTEAGAVGAFLALLVALARRSLTPARLWEVLKETGHVTASICILFVAATMYSRMLALSGFPNALGDWLTA
SQFGLTGIIIAYVALILILGSILDSTSIMLITVPLFAGPIVALGADLIWFGIITIIAVEIGLLTPPLGISAFVVKANLQD
DRIGLKDIFLGAAPFAGIMLICLILVIVFPALSLALIR
>Mature_437_residues
SFELTVGFGSVFLMVALIWLGLHVAVALAAASFLGVWLIRGDVELAARLLGLAAEDSIASYVFGVIPLFVLMGLLVERAG
VGRDAFDVGESAFRRIKGGLGVATVGANAIFAAITGVSIASAAVFTKVAVPQMIDRGYNPRFAVGVVAGSSVLGMLIPPS
LLLIIYGVLVEVSIGDLFLAGILPGLLLAVLYAIGILVMARKTPGFVGTPPAEDDGRPGLGWPTICAKLFPIVLLIGAVF
GGLYGGWFTPTEAGAVGAFLALLVALARRSLTPARLWEVLKETGHVTASICILFVAATMYSRMLALSGFPNALGDWLTAS
QFGLTGIIIAYVALILILGSILDSTSIMLITVPLFAGPIVALGADLIWFGIITIIAVEIGLLTPPLGISAFVVKANLQDD
RIGLKDIFLGAAPFAGIMLICLILVIVFPALSLALIR

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid [H]

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=370, Percent_Identity=31.3513513513514, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR007387
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM; PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 45512; Mature: 45381

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFELTVGFGSVFLMVALIWLGLHVAVALAAASFLGVWLIRGDVELAARLLGLAAEDSIA
CCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SYVFGVIPLFVLMGLLVERAGVGRDAFDVGESAFRRIKGGLGVATVGANAIFAAITGVSI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ASAAVFTKVAVPQMIDRGYNPRFAVGVVAGSSVLGMLIPPSLLLIIYGVLVEVSIGDLFL
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AGILPGLLLAVLYAIGILVMARKTPGFVGTPPAEDDGRPGLGWPTICAKLFPIVLLIGAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGGLYGGWFTPTEAGAVGAFLALLVALARRSLTPARLWEVLKETGHVTASICILFVAATM
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
YSRMLALSGFPNALGDWLTASQFGLTGIIIAYVALILILGSILDSTSIMLITVPLFAGPI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
VALGADLIWFGIITIIAVEIGLLTPPLGISAFVVKANLQDDRIGLKDIFLGAAPFAGIML
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCHHHHHHH
ICLILVIVFPALSLALIR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFELTVGFGSVFLMVALIWLGLHVAVALAAASFLGVWLIRGDVELAARLLGLAAEDSIA
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SYVFGVIPLFVLMGLLVERAGVGRDAFDVGESAFRRIKGGLGVATVGANAIFAAITGVSI
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
ASAAVFTKVAVPQMIDRGYNPRFAVGVVAGSSVLGMLIPPSLLLIIYGVLVEVSIGDLFL
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AGILPGLLLAVLYAIGILVMARKTPGFVGTPPAEDDGRPGLGWPTICAKLFPIVLLIGAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
FGGLYGGWFTPTEAGAVGAFLALLVALARRSLTPARLWEVLKETGHVTASICILFVAATM
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
YSRMLALSGFPNALGDWLTASQFGLTGIIIAYVALILILGSILDSTSIMLITVPLFAGPI
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHH
VALGADLIWFGIITIIAVEIGLLTPPLGISAFVVKANLQDDRIGLKDIFLGAAPFAGIML
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCHHHHHHH
ICLILVIVFPALSLALIR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]