Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053364
Identifier: 89053364
GI number: 89053364
Start: 829185
End: 829913
Strand: Direct
Name: 89053364
Synonym: Jann_0873
Alternate gene names: NA
Gene position: 829185-829913 (Clockwise)
Preceding gene: 89053363
Following gene: 89053365
Centisome position: 19.2
GC content: 62.55
Gene sequence:
>729_bases ATGCCCGATCCCTATTACGCCTCTGTCGATGATCTGAAACAGGAGCTGGTCCACGGTTTCCGCGCCATGGCACTGAACGA TCTGGGCCTTGGCCTTCTGGCGCATCTGACCGCGCGGATGCCGGGGGCGGACACGTATTGGACGTATCAGATCGGCCAAT CCGTCGAAGAGGTCCGGTTGAGTGATCTGCGAGAGGTCGGGTTCGATGCCAAGGCGGTGGATGGGACAAGCCCGATCAAT CCGTCCATCCTGTGCCACGGCGATGTCTACCGCGCGCGGCCCGATATCACCTGCATCCTGCACCACCATTCGAAGGCGTC CATTGCCCTGGGCGCGATCGGCGCAAACCTGGCACCCATCGACCGAAACTCAGGCCGCTGGCATGATGAGATTAACATCG TGGAAGACTTCGACGCGCCCGAGATTGCCAATCAAGGCACGTCCATGGTGGACGCGCTTGGGTCCGGCAAGGCGCTGATC CTGAAACACCACGGGGCCCTGGTCACCGGCCGCAACATCCGCGAAACCGTCGTCGCAGCGGCCGAGTTGGACCGCGCGAT GGAGGTGCAACTGATGGCCATGGGCGCAGGCACCCCGGCCGAGATCCCGCAGGCCGAGATCGACGATTGCAAGAAATTCC TCGCCTCTGACATGTTCGCGGACGGCACCTGGAACTGGTATATGCGTACGATGGCACGCCGGGGCCTTCTGGACGGCGCG TCTGAGTGA
Upstream 100 bases:
>100_bases CCTCGGCGCCGCCCCCTTCGCAGGTATCATGCTGATCTGTCTGATCCTCGTCATTGTCTTCCCGGCCCTGTCACTGGCCC TTATCCGATAGGAGCTTTCC
Downstream 100 bases:
>100_bases TGGTGGCGCTGAGGGTCAATGGCGAGGCAATCGATGTGGACGTGGATGAGGCGACGCCGCTTTTGTTCGTGTTGCGCAAT GATCTTGGGCTGAAAGGGGC
Product: class II aldolase/adducin-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MPDPYYASVDDLKQELVHGFRAMALNDLGLGLLAHLTARMPGADTYWTYQIGQSVEEVRLSDLREVGFDAKAVDGTSPIN PSILCHGDVYRARPDITCILHHHSKASIALGAIGANLAPIDRNSGRWHDEINIVEDFDAPEIANQGTSMVDALGSGKALI LKHHGALVTGRNIRETVVAAAELDRAMEVQLMAMGAGTPAEIPQAEIDDCKKFLASDMFADGTWNWYMRTMARRGLLDGA SE
Sequences:
>Translated_242_residues MPDPYYASVDDLKQELVHGFRAMALNDLGLGLLAHLTARMPGADTYWTYQIGQSVEEVRLSDLREVGFDAKAVDGTSPIN PSILCHGDVYRARPDITCILHHHSKASIALGAIGANLAPIDRNSGRWHDEINIVEDFDAPEIANQGTSMVDALGSGKALI LKHHGALVTGRNIRETVVAAAELDRAMEVQLMAMGAGTPAEIPQAEIDDCKKFLASDMFADGTWNWYMRTMARRGLLDGA SE >Mature_241_residues PDPYYASVDDLKQELVHGFRAMALNDLGLGLLAHLTARMPGADTYWTYQIGQSVEEVRLSDLREVGFDAKAVDGTSPINP SILCHGDVYRARPDITCILHHHSKASIALGAIGANLAPIDRNSGRWHDEINIVEDFDAPEIANQGTSMVDALGSGKALIL KHHGALVTGRNIRETVVAAAELDRAMEVQLMAMGAGTPAEIPQAEIDDCKKFLASDMFADGTWNWYMRTMARRGLLDGAS E
Specific function: Unknown
COG id: COG0235
COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldolase class II family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 [H]
Pfam domain/function: PF00596 Aldolase_II [H]
EC number: NA
Molecular weight: Translated: 26313; Mature: 26182
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPYYASVDDLKQELVHGFRAMALNDLGLGLLAHLTARMPGADTYWTYQIGQSVEEVRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHH SDLREVGFDAKAVDGTSPINPSILCHGDVYRARPDITCILHHHSKASIALGAIGANLAPI HHHHHHCCCCEECCCCCCCCCCEEECCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCC DRNSGRWHDEINIVEDFDAPEIANQGTSMVDALGSGKALILKHHGALVTGRNIRETVVAA CCCCCCCCCCCCEEECCCCCHHHCCCHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHH AELDRAMEVQLMAMGAGTPAEIPQAEIDDCKKFLASDMFADGTWNWYMRTMARRGLLDGA HHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC SE CC >Mature Secondary Structure PDPYYASVDDLKQELVHGFRAMALNDLGLGLLAHLTARMPGADTYWTYQIGQSVEEVRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCHHHHHH SDLREVGFDAKAVDGTSPINPSILCHGDVYRARPDITCILHHHSKASIALGAIGANLAPI HHHHHHCCCCEECCCCCCCCCCEEECCCCEECCCCEEEEEEECCCCEEEEEECCCCCCCC DRNSGRWHDEINIVEDFDAPEIANQGTSMVDALGSGKALILKHHGALVTGRNIRETVVAA CCCCCCCCCCCCEEECCCCCHHHCCCHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHH AELDRAMEVQLMAMGAGTPAEIPQAEIDDCKKFLASDMFADGTWNWYMRTMARRGLLDGA HHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]