Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053313
Identifier: 89053313
GI number: 89053313
Start: 779421
End: 779978
Strand: Direct
Name: 89053313
Synonym: Jann_0822
Alternate gene names: NA
Gene position: 779421-779978 (Clockwise)
Preceding gene: 89053312
Following gene: 89053314
Centisome position: 18.05
GC content: 60.93
Gene sequence:
>558_bases ATGCCGCTCGCTCGCCTTCTGACTGCCGTCCTCTGCCTTGCGTTGATCGGGTGCGGGATACCGCCGCTGAACACTGCAAC TGTCAGTCAAACTCCGGCAGGTGCGGCGCAATTTGCTTTGGCGCAAAGGGCCGTTCAGGCCTGTGGGCGCCTGCCAGACA CGGATGCAGCGCGGTCTGCATTGGGGCGGGTTGGCTTATCGGGCGATGGTACGATCATGACGTCATCCGATCAGGCTGTC ATCGTTTTAATGCAGGGCGGTCGCTGCGCGGTCGGCCTGCGGAGCATGACGCCCGAACAGTCTCATCAATTGGCGCAATC CTGGGTTCGCACTTACGACGCAATCTCGAATGCGGAGGCAGGCGACGGGCTGTCGCCTCTCGTGATCGGGGCCTGGCGCT CATTCACGCCTAACCGCAGGGTGTTCATCGCAGCGCATCGGACATGGCCCAACGAGTATTCTCAATTTCCGGATGTTGCT GGCGCGGCCGTGACCTTGAGCTACACAATCTTGGGCCCCCGATCGGGTACGCCTGCTTACACATATACGCTTCGTTGA
Upstream 100 bases:
>100_bases CAAGGAGATCATCAACAATTCCGGCCTCGACGTGATCGCCGCCGACGACCTGAAAGACGGCGCGCAGAAGATCGTGAAGG CTGTGAAGGGATAGAGCAAC
Downstream 100 bases:
>100_bases CCGGCATGTGCACAGCCATTGGACACCAAACTTCGGGGGCTGGACACAGCTTCCATAGAAGAAATCAAGACGCGGCGATG ATCGCCAAGACCCGCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPLARLLTAVLCLALIGCGIPPLNTATVSQTPAGAAQFALAQRAVQACGRLPDTDAARSALGRVGLSGDGTIMTSSDQAV IVLMQGGRCAVGLRSMTPEQSHQLAQSWVRTYDAISNAEAGDGLSPLVIGAWRSFTPNRRVFIAAHRTWPNEYSQFPDVA GAAVTLSYTILGPRSGTPAYTYTLR
Sequences:
>Translated_185_residues MPLARLLTAVLCLALIGCGIPPLNTATVSQTPAGAAQFALAQRAVQACGRLPDTDAARSALGRVGLSGDGTIMTSSDQAV IVLMQGGRCAVGLRSMTPEQSHQLAQSWVRTYDAISNAEAGDGLSPLVIGAWRSFTPNRRVFIAAHRTWPNEYSQFPDVA GAAVTLSYTILGPRSGTPAYTYTLR >Mature_184_residues PLARLLTAVLCLALIGCGIPPLNTATVSQTPAGAAQFALAQRAVQACGRLPDTDAARSALGRVGLSGDGTIMTSSDQAVI VLMQGGRCAVGLRSMTPEQSHQLAQSWVRTYDAISNAEAGDGLSPLVIGAWRSFTPNRRVFIAAHRTWPNEYSQFPDVAG AAVTLSYTILGPRSGTPAYTYTLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19446; Mature: 19315
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLARLLTAVLCLALIGCGIPPLNTATVSQTPAGAAQFALAQRAVQACGRLPDTDAARSA CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LGRVGLSGDGTIMTSSDQAVIVLMQGGRCAVGLRSMTPEQSHQLAQSWVRTYDAISNAEA HHCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC GDGLSPLVIGAWRSFTPNRRVFIAAHRTWPNEYSQFPDVAGAAVTLSYTILGPRSGTPAY CCCCCCCEEECCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCE TYTLR EEEEC >Mature Secondary Structure PLARLLTAVLCLALIGCGIPPLNTATVSQTPAGAAQFALAQRAVQACGRLPDTDAARSA CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH LGRVGLSGDGTIMTSSDQAVIVLMQGGRCAVGLRSMTPEQSHQLAQSWVRTYDAISNAEA HHCCCCCCCCCEEECCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCC GDGLSPLVIGAWRSFTPNRRVFIAAHRTWPNEYSQFPDVAGAAVTLSYTILGPRSGTPAY CCCCCCCEEECCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCCE TYTLR EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA