Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89053314
Identifier: 89053314
GI number: 89053314
Start: 779984
End: 780574
Strand: Direct
Name: 89053314
Synonym: Jann_0823
Alternate gene names: NA
Gene position: 779984-780574 (Clockwise)
Preceding gene: 89053313
Following gene: 89053315
Centisome position: 18.06
GC content: 61.25
Gene sequence:
>591_bases ATGTGCACAGCCATTGGACACCAAACTTCGGGGGCTGGACACAGCTTCCATAGAAGAAATCAAGACGCGGCGATGATCGC CAAGACCCGCGAACGACAAAGGCTAAACATGATGGGTGGACGCGACACCACCACCAACTGGCTCGCAAGATTGATCCGTT CGGCGCCCTGCCGGCGCGGGATTGGCGCAGCGATGTTTGTCGCACATGCAATTGCTACACCGGTAACGGCACAGGCCCCA TCGGTGGGCAATGTTGTTGCGGACCCGGCCGTATTGGGCCGCATGTTTGCGAACGTCTGCGTGGCCTCCAATGACGCAAT CCGAGTTGAGGCTGCGCTGCGGGAGGTCGGCATGGTCGACAACCCGGAAACGGGGACGTTCTTCCACCAGTTGTTCGACA TGTCCGTCAACGCCACGGGGGGCGGATGCTCCATGGTGTTTGTCACGGATCTGGAGGACGACGCAGCCATGGCGGCGTTC CAGACATCGATGGTACAGACCCACGGCGGCGGCGTGCCGACGTTTTCGATGAATGTGCGCGAAAGTGGCGGCGAACGCTA CGTCCGCGCCCGGATCGAGGTGCCGTGGTGA
Upstream 100 bases:
>100_bases AATTTCCGGATGTTGCTGGCGCGGCCGTGACCTTGAGCTACACAATCTTGGGCCCCCGATCGGGTACGCCTGCTTACACA TATACGCTTCGTTGACCGGC
Downstream 100 bases:
>100_bases TGGAAACGCGCCCGTCCATGGCCGGTCCCCAAGTCATTCCGGCCTTCGTCATCAACCTCAAACGGGCCGCTGCCCGGCAA GTGATCATGCGGGAGACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MCTAIGHQTSGAGHSFHRRNQDAAMIAKTRERQRLNMMGGRDTTTNWLARLIRSAPCRRGIGAAMFVAHAIATPVTAQAP SVGNVVADPAVLGRMFANVCVASNDAIRVEAALREVGMVDNPETGTFFHQLFDMSVNATGGGCSMVFVTDLEDDAAMAAF QTSMVQTHGGGVPTFSMNVRESGGERYVRARIEVPW
Sequences:
>Translated_196_residues MCTAIGHQTSGAGHSFHRRNQDAAMIAKTRERQRLNMMGGRDTTTNWLARLIRSAPCRRGIGAAMFVAHAIATPVTAQAP SVGNVVADPAVLGRMFANVCVASNDAIRVEAALREVGMVDNPETGTFFHQLFDMSVNATGGGCSMVFVTDLEDDAAMAAF QTSMVQTHGGGVPTFSMNVRESGGERYVRARIEVPW >Mature_196_residues MCTAIGHQTSGAGHSFHRRNQDAAMIAKTRERQRLNMMGGRDTTTNWLARLIRSAPCRRGIGAAMFVAHAIATPVTAQAP SVGNVVADPAVLGRMFANVCVASNDAIRVEAALREVGMVDNPETGTFFHQLFDMSVNATGGGCSMVFVTDLEDDAAMAAF QTSMVQTHGGGVPTFSMNVRESGGERYVRARIEVPW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21002; Mature: 21002
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCTAIGHQTSGAGHSFHRRNQDAAMIAKTRERQRLNMMGGRDTTTNWLARLIRSAPCRRG CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC IGAAMFVAHAIATPVTAQAPSVGNVVADPAVLGRMFANVCVASNDAIRVEAALREVGMVD CHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCC NPETGTFFHQLFDMSVNATGGGCSMVFVTDLEDDAAMAAFQTSMVQTHGGGVPTFSMNVR CCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECC ESGGERYVRARIEVPW CCCCCEEEEEEEECCC >Mature Secondary Structure MCTAIGHQTSGAGHSFHRRNQDAAMIAKTRERQRLNMMGGRDTTTNWLARLIRSAPCRRG CCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC IGAAMFVAHAIATPVTAQAPSVGNVVADPAVLGRMFANVCVASNDAIRVEAALREVGMVD CHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCC NPETGTFFHQLFDMSVNATGGGCSMVFVTDLEDDAAMAAFQTSMVQTHGGGVPTFSMNVR CCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECC ESGGERYVRARIEVPW CCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA