Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is aroA
Identifier: 89053199
GI number: 89053199
Start: 680451
End: 681803
Strand: Direct
Name: aroA
Synonym: Jann_0708
Alternate gene names: 89053199
Gene position: 680451-681803 (Clockwise)
Preceding gene: 89053198
Following gene: 89053200
Centisome position: 15.76
GC content: 67.18
Gene sequence:
>1353_bases ATGTCAGCCCATGGTGATCCCAAACCGATGACGGCCCGCAAGGGCGGCGCGTTGACAGGCACGGCGGAGGTCCCCGGTGA CAAGTCGATCTCCCACCGGTCGCTGATCTTTGGCGCAATGGCCGTTGGAGAGACCCGGGTGACGGGGTTGCTGGAAGGGC AAGACGTCCTCGACACCGCCTCGGCGATGCGGGCGTTCGGGGCGGAGGTGGCGCGAGAGGACGATGGCACGTGGTCGATC CACGGTGTGGGAGTCGGCGGTTTTGTGGAGCCGGACGACGTGCTGGATTGCGGCAATTCGGGCACCGGCGTGCGGCTCTT GATGGGAGCGATGGCAACGACGCCGATTTCGGTGACGTTCACGGGCGACGCGTCCCTGCGGTCACGGCCCATGGCGCGGG TCACGGACCCGTTGGCGCTGTTTGGCACCAGGGCCTACGGGCGTGCACAGGGGCGCTTGCCGATGACGTTGGTGGGCGCG GAGGCCCCCATGCCGGTGCGCTATGCCACGCCGGTGCCGTCGGCGCAGGTGAAGTCCGCCGTTCTGTTGGCGGGGCTGAA CGCGCCGGGTGAGACGGTCGTGATCGAGGCTGAGGCGACCCGCGACCACTCCGAGCGGATGCTGGCGGGGTTTGGGGCTC AGATATCCACCGAGGTGACGCAGGAAGGCCGGGTGATCACGCTGACAGGCCAGCCGGAACTGACGCCGCAGGTTATTGCC GTGCCGCGCGACCCAAGCTCTGCCGCGTTTCCGGTCTGTGCAGCCATCATCACCGAAGGCTCGGACGTGTTGGTGCCCAA TATTGGGCTGAACCCGACGCGCGCCGGTCTGTTCGAGACGCTGCGCGATATGGGCGCGGATCTGACCTATGAGAACCCGC GCGAAGAGGGGGGGGAGCCGGTGGCCGACCTGCGCGCGAAGTTTTCACCCGACATGAAGGGGATCGAGGTCCCGCCCGAG CGCGCGGCGAGCATGATTGACGAATACCCGATCCTCTCGGTCGTCGCGGCCAACGCCGAGGGCACAACGGTCATGCGCGG CGTCAAAGAGTTGCGGGTGAAGGAAAGCGACCGGATAGCCGCCATGGCGGACGGGCTGCGCCTGAACGGGATTGAAGTTG AAGATGGCCCCGATTGGTGGATCGTCCATGGGCGCGGTCCCGGCGGCATGGCGGGCGGGGCGACGGTGGCCACGCATCTC GATCATCGGATCGCGATGTCCTTCCTCTGTGCCGGGTTCGCCAGTCAGCAGGGCATCACGATTGACGACAGTGGCCCCAT CGCCACGTCCTTCCCGATTTTCGAGCCGCTGATGCGGGACCTCGGGGCACGGCTGGACCGCGCAAACGCCTGA
Upstream 100 bases:
>100_bases TGGAGCGGCGCGCCCGTCTTTGAGGTGTGGACGGCATGGGGAGGCGGGGCTATCAACCGCCTTGGAAATACTGGTCCGGT CTATAGTCGAGAGTGCTCTG
Downstream 100 bases:
>100_bases CTTGATCGGACGTGGCCCGGTGGGCTAACCTATGGGCAGGCTGGCGCGGCCTGCCGTCCGCATGGGGCATTGCCCCAAGG GTGAATGCGCCAAAACGATC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSAHGDPKPMTARKGGALTGTAEVPGDKSISHRSLIFGAMAVGETRVTGLLEGQDVLDTASAMRAFGAEVAREDDGTWSI HGVGVGGFVEPDDVLDCGNSGTGVRLLMGAMATTPISVTFTGDASLRSRPMARVTDPLALFGTRAYGRAQGRLPMTLVGA EAPMPVRYATPVPSAQVKSAVLLAGLNAPGETVVIEAEATRDHSERMLAGFGAQISTEVTQEGRVITLTGQPELTPQVIA VPRDPSSAAFPVCAAIITEGSDVLVPNIGLNPTRAGLFETLRDMGADLTYENPREEGGEPVADLRAKFSPDMKGIEVPPE RAASMIDEYPILSVVAANAEGTTVMRGVKELRVKESDRIAAMADGLRLNGIEVEDGPDWWIVHGRGPGGMAGGATVATHL DHRIAMSFLCAGFASQQGITIDDSGPIATSFPIFEPLMRDLGARLDRANA
Sequences:
>Translated_450_residues MSAHGDPKPMTARKGGALTGTAEVPGDKSISHRSLIFGAMAVGETRVTGLLEGQDVLDTASAMRAFGAEVAREDDGTWSI HGVGVGGFVEPDDVLDCGNSGTGVRLLMGAMATTPISVTFTGDASLRSRPMARVTDPLALFGTRAYGRAQGRLPMTLVGA EAPMPVRYATPVPSAQVKSAVLLAGLNAPGETVVIEAEATRDHSERMLAGFGAQISTEVTQEGRVITLTGQPELTPQVIA VPRDPSSAAFPVCAAIITEGSDVLVPNIGLNPTRAGLFETLRDMGADLTYENPREEGGEPVADLRAKFSPDMKGIEVPPE RAASMIDEYPILSVVAANAEGTTVMRGVKELRVKESDRIAAMADGLRLNGIEVEDGPDWWIVHGRGPGGMAGGATVATHL DHRIAMSFLCAGFASQQGITIDDSGPIATSFPIFEPLMRDLGARLDRANA >Mature_449_residues SAHGDPKPMTARKGGALTGTAEVPGDKSISHRSLIFGAMAVGETRVTGLLEGQDVLDTASAMRAFGAEVAREDDGTWSIH GVGVGGFVEPDDVLDCGNSGTGVRLLMGAMATTPISVTFTGDASLRSRPMARVTDPLALFGTRAYGRAQGRLPMTLVGAE APMPVRYATPVPSAQVKSAVLLAGLNAPGETVVIEAEATRDHSERMLAGFGAQISTEVTQEGRVITLTGQPELTPQVIAV PRDPSSAAFPVCAAIITEGSDVLVPNIGLNPTRAGLFETLRDMGADLTYENPREEGGEPVADLRAKFSPDMKGIEVPPER AASMIDEYPILSVVAANAEGTTVMRGVKELRVKESDRIAAMADGLRLNGIEVEDGPDWWIVHGRGPGGMAGGATVATHLD HRIAMSFLCAGFASQQGITIDDSGPIATSFPIFEPLMRDLGARLDRANA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family
Homologues:
Organism=Escherichia coli, GI1787137, Length=432, Percent_Identity=30.5555555555556, Blast_Score=135, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6320332, Length=467, Percent_Identity=29.1220556745182, Blast_Score=138, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROA_JANSC (Q28UI7)
Other databases:
- EMBL: CP000264 - RefSeq: YP_508650.1 - ProteinModelPortal: Q28UI7 - SMR: Q28UI7 - STRING: Q28UI7 - GeneID: 3933151 - GenomeReviews: CP000264_GR - KEGG: jan:Jann_0708 - eggNOG: COG0128 - HOGENOM: HBG646626 - OMA: IEVPPER - ProtClustDB: PRK02427 - BioCyc: JSP290400:JANN_0708-MONOMER - GO: GO:0005737 - HAMAP: MF_00210 - InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 - Gene3D: G3DSA:3.65.10.10 - PIRSF: PIRSF000505 - TIGRFAMs: TIGR01356
Pfam domain/function: PF00275 EPSP_synthase; SSF55205 RNA3'_cycl/enolpyr_transf_A/B
EC number: =2.5.1.19
Molecular weight: Translated: 47051; Mature: 46920
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00104 EPSP_SYNTHASE_1; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAHGDPKPMTARKGGALTGTAEVPGDKSISHRSLIFGAMAVGETRVTGLLEGQDVLDTA CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHEEEHHHCCCHHEEEEECCCHHHHHH SAMRAFGAEVAREDDGTWSIHGVGVGGFVEPDDVLDCGNSGTGVRLLMGAMATTPISVTF HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEE TGDASLRSRPMARVTDPLALFGTRAYGRAQGRLPMTLVGAEAPMPVRYATPVPSAQVKSA ECCCHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCHHHCCE VLLAGLNAPGETVVIEAEATRDHSERMLAGFGAQISTEVTQEGRVITLTGQPELTPQVIA EEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCEEEE VPRDPSSAAFPVCAAIITEGSDVLVPNIGLNPTRAGLFETLRDMGADLTYENPREEGGEP ECCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCC VADLRAKFSPDMKGIEVPPERAASMIDEYPILSVVAANAEGTTVMRGVKELRVKESDRIA HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE AMADGLRLNGIEVEDGPDWWIVHGRGPGGMAGGATVATHLDHRIAMSFLCAGFASQQGIT EHHCCEEECCEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE IDDSGPIATSFPIFEPLMRDLGARLDRANA ECCCCCCEECCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAHGDPKPMTARKGGALTGTAEVPGDKSISHRSLIFGAMAVGETRVTGLLEGQDVLDTA CCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHEEEHHHCCCHHEEEEECCCHHHHHH SAMRAFGAEVAREDDGTWSIHGVGVGGFVEPDDVLDCGNSGTGVRLLMGAMATTPISVTF HHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCHHHHHHHHHHCCCEEEEE TGDASLRSRPMARVTDPLALFGTRAYGRAQGRLPMTLVGAEAPMPVRYATPVPSAQVKSA ECCCHHHCCCHHHHCCCHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCHHHCCE VLLAGLNAPGETVVIEAEATRDHSERMLAGFGAQISTEVTQEGRVITLTGQPELTPQVIA EEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCEEEE VPRDPSSAAFPVCAAIITEGSDVLVPNIGLNPTRAGLFETLRDMGADLTYENPREEGGEP ECCCCCCCHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCCC VADLRAKFSPDMKGIEVPPERAASMIDEYPILSVVAANAEGTTVMRGVKELRVKESDRIA HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEE AMADGLRLNGIEVEDGPDWWIVHGRGPGGMAGGATVATHLDHRIAMSFLCAGFASQQGIT EHHCCEEECCEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE IDDSGPIATSFPIFEPLMRDLGARLDRANA ECCCCCCEECCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA