Click here to switch to the map view.

The map label for this gene is 88607905

Identifier: 88607905

GI number: 88607905

Start: 171299

End: 171409

Strand: Direct

Name: 88607905

Synonym: APH_0169

Alternate gene names: NA

Gene position: 171299-171409 (Clockwise)

Preceding gene: 88607041

Following gene: 88607024

Centisome position: 11.64

GC content: 36.04

Gene sequence:

>111_bases
GTGCCAACTATGTCGCAAAGAGTTGTGGGTGTATTTGATATAGAACTTAGTATAATATTGAGGTATGTAGCAACGCATGC
CGAGTGTATTATATGGTATATAGCATTATAG

Upstream 100 bases:

>100_bases
TTCTTACCCATGCATAGTGCATATCGCCCGGATAGCAGCGCGAATTCATTGTAGTTTATCTTGATATTGTGACGCAATAG
CTAGTAAAGTATTTTACAAT

Downstream 100 bases:

>100_bases
GTGCTATGGCAGGCGCTGCTATGTAGTGCAGGAGTATAAAGACAGCGAGTCGATATACCATAAGCAATAAAAAGAGGATG
GGAACAGTACGCTGAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 36; Mature: 35

Protein sequence:

>36_residues
MPTMSQRVVGVFDIELSIILRYVATHAECIIWYIAL

Sequences:

>Translated_36_residues
MPTMSQRVVGVFDIELSIILRYVATHAECIIWYIAL
>Mature_35_residues
PTMSQRVVGVFDIELSIILRYVATHAECIIWYIAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4153; Mature: 4022

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTMSQRVVGVFDIELSIILRYVATHAECIIWYIAL
CCCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure 
PTMSQRVVGVFDIELSIILRYVATHAECIIWYIAL
CCCCCCEEEEEHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA