| Definition | Anaplasma phagocytophilum HZ, complete genome. |
|---|---|
| Accession | NC_007797 |
| Length | 1,471,282 |
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The map label for this gene is 88607709
Identifier: 88607709
GI number: 88607709
Start: 345234
End: 346217
Strand: Direct
Name: 88607709
Synonym: APH_0355
Alternate gene names: NA
Gene position: 345234-346217 (Clockwise)
Preceding gene: 88607853
Following gene: 88607600
Centisome position: 23.46
GC content: 41.26
Gene sequence:
>984_bases ATGCTACAAACCCTGTGCAGGATAGCTATTAAGATGAGACGCGTTACGGGTATGATGGATTTTATAAACAACTCTGCTTC TAGGAACGCAGTAGGTTTTTATGTTCTATTTACGGTATTGCTTATTTTTTCTCTATCTGCACAGGCTGCTGCGGGAAAGG CCATTGTAGGGCTATTATCTACTCAGTACTCCACCTATGCCGGAGAAGATAGGACCGCCAAGGACATTGAGGGCTTATTA CTAAAGCTTGGTGCTGGGAAAGTAGTTCTCATAGATTATAATGTGATAATGAAAGAACTTGGTGCTGGTTCTGACGCCAT TAGTATTGCGAGGAGAGTGGATAAGTTTCTCTTAGATAATAAGATAGACAGGGTGTTTATTCCTGGTAACTACTACAACA TAAGTAGTCCTCCTTTTCCGCCGGTTCCGTACAGGCAGTTAGTTACTGATGCCATAGTTAGTGTTATGCAAGATAGACAT AATATTAAGCTATTAGCTATTTGCGGTGGATTGCAGGGGGTATTGCATTCTCAGAAAGTGAAGATAAAGCGCATAGATAG CATGCTCCGCTCCAGTGAAATGGTGGCAGCACATAATGTGTCTGAAAAACATCCAAGGGAGTATGGTAAGTCACTGCTTA AAGTTAATGTGGTGCCTGGAAGTAAGCTAGCAAAGATTATTACATCTGTTAGAGGCTCAGAAGAAGAGGATTCCTTTAGG TTTTATGTTCCCGATATGCACAGTGAGGGTATAGACATCAGTGAGCATAATGTAAAGAGATTGCTAGATCTTGGATACAA GGTTACTGCATATGCTGATGATGGGATTATAGAGGCTGTAGAGGATAGTAGAGGTAACATGTTGTTACAGATGCATCCAG AATTTCTCTTGATAGGTATGGAGAAAAAAGTAGGGCAGCATGCTGAAGTTGATGTGTCCATCAAGGTAGCACTGGGTATC ATGGATGATTTTCTCTCGAATTGA
Upstream 100 bases:
>100_bases TACATTATTCCTACGTTTAAATTATGATTATCAATTAATAAAGATATATCTTTGTTAAAATATTTAAAAACATTATGATT TAGCAAAAATTAGGGGATTG
Downstream 100 bases:
>100_bases GGTGAAGCAATATAGCTGAAATGTTTGTGGTGATTTTGCCGTAGGTATCTAACGGTGCGTGAGCTTTTTCAGTCTTCGGA TGCTGCGTTACGAGGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MLQTLCRIAIKMRRVTGMMDFINNSASRNAVGFYVLFTVLLIFSLSAQAAAGKAIVGLLSTQYSTYAGEDRTAKDIEGLL LKLGAGKVVLIDYNVIMKELGAGSDAISIARRVDKFLLDNKIDRVFIPGNYYNISSPPFPPVPYRQLVTDAIVSVMQDRH NIKLLAICGGLQGVLHSQKVKIKRIDSMLRSSEMVAAHNVSEKHPREYGKSLLKVNVVPGSKLAKIITSVRGSEEEDSFR FYVPDMHSEGIDISEHNVKRLLDLGYKVTAYADDGIIEAVEDSRGNMLLQMHPEFLLIGMEKKVGQHAEVDVSIKVALGI MDDFLSN
Sequences:
>Translated_327_residues MLQTLCRIAIKMRRVTGMMDFINNSASRNAVGFYVLFTVLLIFSLSAQAAAGKAIVGLLSTQYSTYAGEDRTAKDIEGLL LKLGAGKVVLIDYNVIMKELGAGSDAISIARRVDKFLLDNKIDRVFIPGNYYNISSPPFPPVPYRQLVTDAIVSVMQDRH NIKLLAICGGLQGVLHSQKVKIKRIDSMLRSSEMVAAHNVSEKHPREYGKSLLKVNVVPGSKLAKIITSVRGSEEEDSFR FYVPDMHSEGIDISEHNVKRLLDLGYKVTAYADDGIIEAVEDSRGNMLLQMHPEFLLIGMEKKVGQHAEVDVSIKVALGI MDDFLSN >Mature_327_residues MLQTLCRIAIKMRRVTGMMDFINNSASRNAVGFYVLFTVLLIFSLSAQAAAGKAIVGLLSTQYSTYAGEDRTAKDIEGLL LKLGAGKVVLIDYNVIMKELGAGSDAISIARRVDKFLLDNKIDRVFIPGNYYNISSPPFPPVPYRQLVTDAIVSVMQDRH NIKLLAICGGLQGVLHSQKVKIKRIDSMLRSSEMVAAHNVSEKHPREYGKSLLKVNVVPGSKLAKIITSVRGSEEEDSFR FYVPDMHSEGIDISEHNVKRLLDLGYKVTAYADDGIIEAVEDSRGNMLLQMHPEFLLIGMEKKVGQHAEVDVSIKVALGI MDDFLSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36133; Mature: 36133
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50030 UBA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQTLCRIAIKMRRVTGMMDFINNSASRNAVGFYVLFTVLLIFSLSAQAAAGKAIVGLLS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH TQYSTYAGEDRTAKDIEGLLLKLGAGKVVLIDYNVIMKELGAGSDAISIARRVDKFLLDN HCCHHCCCCCCCHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCC KIDRVFIPGNYYNISSPPFPPVPYRQLVTDAIVSVMQDRHNIKLLAICGGLQGVLHSQKV CCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH KIKRIDSMLRSSEMVAAHNVSEKHPREYGKSLLKVNVVPGSKLAKIITSVRGSEEEDSFR HHHHHHHHHHHCHHHHHCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEE FYVPDMHSEGIDISEHNVKRLLDLGYKVTAYADDGIIEAVEDSRGNMLLQMHPEFLLIGM EECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCEEEEEC EKKVGQHAEVDVSIKVALGIMDDFLSN HHHCCCCCCEEEEEEEEHHHHHHHHCC >Mature Secondary Structure MLQTLCRIAIKMRRVTGMMDFINNSASRNAVGFYVLFTVLLIFSLSAQAAAGKAIVGLLS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHH TQYSTYAGEDRTAKDIEGLLLKLGAGKVVLIDYNVIMKELGAGSDAISIARRVDKFLLDN HCCHHCCCCCCCHHHHHHHHHEECCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHCC KIDRVFIPGNYYNISSPPFPPVPYRQLVTDAIVSVMQDRHNIKLLAICGGLQGVLHSQKV CCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH KIKRIDSMLRSSEMVAAHNVSEKHPREYGKSLLKVNVVPGSKLAKIITSVRGSEEEDSFR HHHHHHHHHHHCHHHHHCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEE FYVPDMHSEGIDISEHNVKRLLDLGYKVTAYADDGIIEAVEDSRGNMLLQMHPEFLLIGM EECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCEEEEECCCEEEEEC EKKVGQHAEVDVSIKVALGIMDDFLSN HHHCCCCCCEEEEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA