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The map label for this gene is yaaJ [C]

Identifier: 88607182

GI number: 88607182

Start: 293934

End: 295265

Strand: Reverse

Name: yaaJ [C]

Synonym: APH_0307

Alternate gene names: 88607182

Gene position: 295265-293934 (Counterclockwise)

Preceding gene: 88607890

Following gene: 88607795

Centisome position: 20.07

GC content: 41.59

Gene sequence:

>1332_bases
ATGTACTTTTTGAAGTTGTTTTTGGCTTTTCCGACAGTTTTCCTTTTGCTGTTTTCTGGGTTTAGGCTTTCTTTTTCCTC
TAGGTGGTTGCAATTACGTAGTTTTGCCGATGCCATATCGTGTTTGCTGAAGAATCGGGGTGCTGAATTTTCTTCACTGG
CAGCGCTGTGTGCGATTGTGGGCGGAAATCTTGGAGTAGGTAACTTATCCGGTACTGCTGTTGCTCTGAGAGCTGGAGGT
CCCGGCTTCATAGTATGGATGGTATTCATAATAATACTCACATCAATCATAAAATATGCAACTTGCTATATTAGCATCCG
CACACGGGAGGAACGAAATGGTAGGACGTTCGGAGGGCCGGTTGTATATTCACAACACGCTTTTAAGACAAAGTGGGCTT
CACTTGCAGTAGCCATTATAACGATGGTTTGCGCTGTAACCGTGGGAAACTTGGTTCAAGTAAACTCCTTATCAATATCT
ATGCACCTTATAGGTCAATCACCTCTAAGCGCTGGTATAGTAATGGCTATAGCACTGTTCATAGTAACAAATCTGGGATC
TCTAGGTAGAGTAGTATCCAGAGTGGTCCCTGCGATGACCATATTCTATATTGTGTTAGCTGGATTAACGCTCGGCAAGT
TTGGTAGCAATATCATACCATCATTAAAGCTAATACTCGAAAGTGCATTGAGTCTGAGTAGTCTTCGTGATGGGGCTATA
TTAGCTTTGGTCGCAGAAACCTTTACAATAATTCAAGTAGGGGCTATACGGGGGATATTTGCCACAGATATAGGTTTAGG
GCTTGAGGGAACTGTGCATTCAATGGTAGTAAGCAAGAATGTGGTAGACAGCAACTTCGCTACTCAACAGAGTTTGGTTT
CAATTATTTCTCCGTTTATCGTTGCCTTAGTAACGTTCATCACGACTCTAGTCCTATTAACAACTGGAGTATGGACGGAT
CTCAGTTTAGAGAGCACCAACATGTGTTTTGCGGCTTTCACAAGCGCTTTTGGAAAACACTATACAGAGTATGCGTTGAT
TGCGTTAGTGTTCTGTTTCTCGCTAACAACCATCCTGACCTGGTTTATCTGCTCTAAAGAGGTGCTGGCTTACGTTTCTC
ACAATAACCGTTTTATGGAGAAGTGCTGGACTGCTCTGTTTTTCTTTATTATTCCTTTAGGCTCTTTGGGAGGCTTAAGT
TTATTGTGGGACATCGCTGATATATCTATATCTATATCCATAATAATAAATACACTGGGTATATTGCTTCTGCTGAATCG
TTATAAGAAAGAGATGTTCTCAGCTTTAAGCAAAGATTCGAGTAAAGAGTAG

Upstream 100 bases:

>100_bases
GACGTTGGGATGGGGGAACTACTGTATAGTTTAGTTACTTGTCTTAGGAGGCTGGGTTTGCACTTATAAGTCACTTTTTC
ATCGTTATTGATTGTAGGCT

Downstream 100 bases:

>100_bases
CAGTCTCATAATAACAGTGTTATCGCCCACCACGCAGTGTAGCGTAACTCTCGCGCTGTGATTGCGTACGGAAGGCTTGG
GTATAGGCTATAAAAAGCTT

Product: sodium:alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MYFLKLFLAFPTVFLLLFSGFRLSFSSRWLQLRSFADAISCLLKNRGAEFSSLAALCAIVGGNLGVGNLSGTAVALRAGG
PGFIVWMVFIIILTSIIKYATCYISIRTREERNGRTFGGPVVYSQHAFKTKWASLAVAIITMVCAVTVGNLVQVNSLSIS
MHLIGQSPLSAGIVMAIALFIVTNLGSLGRVVSRVVPAMTIFYIVLAGLTLGKFGSNIIPSLKLILESALSLSSLRDGAI
LALVAETFTIIQVGAIRGIFATDIGLGLEGTVHSMVVSKNVVDSNFATQQSLVSIISPFIVALVTFITTLVLLTTGVWTD
LSLESTNMCFAAFTSAFGKHYTEYALIALVFCFSLTTILTWFICSKEVLAYVSHNNRFMEKCWTALFFFIIPLGSLGGLS
LLWDIADISISISIIINTLGILLLLNRYKKEMFSALSKDSSKE

Sequences:

>Translated_443_residues
MYFLKLFLAFPTVFLLLFSGFRLSFSSRWLQLRSFADAISCLLKNRGAEFSSLAALCAIVGGNLGVGNLSGTAVALRAGG
PGFIVWMVFIIILTSIIKYATCYISIRTREERNGRTFGGPVVYSQHAFKTKWASLAVAIITMVCAVTVGNLVQVNSLSIS
MHLIGQSPLSAGIVMAIALFIVTNLGSLGRVVSRVVPAMTIFYIVLAGLTLGKFGSNIIPSLKLILESALSLSSLRDGAI
LALVAETFTIIQVGAIRGIFATDIGLGLEGTVHSMVVSKNVVDSNFATQQSLVSIISPFIVALVTFITTLVLLTTGVWTD
LSLESTNMCFAAFTSAFGKHYTEYALIALVFCFSLTTILTWFICSKEVLAYVSHNNRFMEKCWTALFFFIIPLGSLGGLS
LLWDIADISISISIIINTLGILLLLNRYKKEMFSALSKDSSKE
>Mature_443_residues
MYFLKLFLAFPTVFLLLFSGFRLSFSSRWLQLRSFADAISCLLKNRGAEFSSLAALCAIVGGNLGVGNLSGTAVALRAGG
PGFIVWMVFIIILTSIIKYATCYISIRTREERNGRTFGGPVVYSQHAFKTKWASLAVAIITMVCAVTVGNLVQVNSLSIS
MHLIGQSPLSAGIVMAIALFIVTNLGSLGRVVSRVVPAMTIFYIVLAGLTLGKFGSNIIPSLKLILESALSLSSLRDGAI
LALVAETFTIIQVGAIRGIFATDIGLGLEGTVHSMVVSKNVVDSNFATQQSLVSIISPFIVALVTFITTLVLLTTGVWTD
LSLESTNMCFAAFTSAFGKHYTEYALIALVFCFSLTTILTWFICSKEVLAYVSHNNRFMEKCWTALFFFIIPLGSLGGLS
LLWDIADISISISIIINTLGILLLLNRYKKEMFSALSKDSSKE

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=426, Percent_Identity=25.8215962441315, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 47931; Mature: 47931

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFLKLFLAFPTVFLLLFSGFRLSFSSRWLQLRSFADAISCLLKNRGAEFSSLAALCAIV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GGNLGVGNLSGTAVALRAGGPGFIVWMVFIIILTSIIKYATCYISIRTREERNGRTFGGP
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC
VVYSQHAFKTKWASLAVAIITMVCAVTVGNLVQVNSLSISMHLIGQSPLSAGIVMAIALF
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEEECCCCHHHHHHHHHHHH
IVTNLGSLGRVVSRVVPAMTIFYIVLAGLTLGKFGSNIIPSLKLILESALSLSSLRDGAI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
LALVAETFTIIQVGAIRGIFATDIGLGLEGTVHSMVVSKNVVDSNFATQQSLVSIISPFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VALVTFITTLVLLTTGVWTDLSLESTNMCFAAFTSAFGKHYTEYALIALVFCFSLTTILT
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFICSKEVLAYVSHNNRFMEKCWTALFFFIIPLGSLGGLSLLWDIADISISISIIINTLG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILLLLNRYKKEMFSALSKDSSKE
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYFLKLFLAFPTVFLLLFSGFRLSFSSRWLQLRSFADAISCLLKNRGAEFSSLAALCAIV
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GGNLGVGNLSGTAVALRAGGPGFIVWMVFIIILTSIIKYATCYISIRTREERNGRTFGGP
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCC
VVYSQHAFKTKWASLAVAIITMVCAVTVGNLVQVNSLSISMHLIGQSPLSAGIVMAIALF
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECEEEEEEEECCCCHHHHHHHHHHHH
IVTNLGSLGRVVSRVVPAMTIFYIVLAGLTLGKFGSNIIPSLKLILESALSLSSLRDGAI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
LALVAETFTIIQVGAIRGIFATDIGLGLEGTVHSMVVSKNVVDSNFATQQSLVSIISPFI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VALVTFITTLVLLTTGVWTDLSLESTNMCFAAFTSAFGKHYTEYALIALVFCFSLTTILT
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFICSKEVLAYVSHNNRFMEKCWTALFFFIIPLGSLGGLSLLWDIADISISISIIINTLG
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILLLLNRYKKEMFSALSKDSSKE
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]