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The map label for this gene is rnpA

Identifier: 88607890

GI number: 88607890

Start: 295297

End: 295659

Strand: Reverse

Name: rnpA

Synonym: APH_0308

Alternate gene names: NA

Gene position: 295659-295297 (Counterclockwise)

Preceding gene: 88607897

Following gene: 88607182

Centisome position: 20.1

GC content: 44.08

Gene sequence:

>363_bases
GTGCGCCTAAAGGGTCTTGTTACTCTCAAAAAAAGGAAAGAATTTGCTCATGCTAGGTTGCATGGGCGCACTGTTAAGAG
TGGTGGTTTGCTGCTACAAGCTGTTGATGATCCTGGTTCAGGGTCTCCAGGCTGTGAAAGCGTTAGGGTTGGTTTTACTG
TAAGTAAAAAGTCTGGAAATGCTGTAGTACGTAATAGAATAAAGCGTAGGCTCCGCGTTGCAGCGCAGAATGTAATAGCT
AAAAACGCGCATAGGGGGTTTTATTATATCTTGATTAGTAGTCGTCGTTTGGCTGACGTTGGGATGGGGGAACTACTGTA
TAGTTTAGTTACTTGTCTTAGGAGGCTGGGTTTGCACTTATAA

Upstream 100 bases:

>100_bases
GGATTGTGAGAAAACGCAGACATGGTTTTCGCGCAAGAATGTCTACTAAATGGGGAAGGAGAATCTTGAATAGACGCCGT
GCTCAGGGTAGGAGTATTCT

Downstream 100 bases:

>100_bases
GTCACTTTTTCATCGTTATTGATTGTAGGCTATGTACTTTTTGAAGTTGTTTTTGGCTTTTCCGACAGTTTTCCTTTTGC
TGTTTTCTGGGTTTAGGCTT

Product: ribonuclease P protein component

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MRLKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGNAVVRNRIKRRLRVAAQNVIA
KNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRLGLHL

Sequences:

>Translated_120_residues
MRLKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGNAVVRNRIKRRLRVAAQNVIA
KNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRLGLHL
>Mature_120_residues
MRLKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGNAVVRNRIKRRLRVAAQNVIA
KNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRLGLHL

Specific function: Unknown

COG id: COG0594

COG function: function code J; RNase P protein component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.26.5

Molecular weight: Translated: 13238; Mature: 13238

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: PS00648 RIBONUCLEASE_P

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGN
CCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCC
AVVRNRIKRRLRVAAQNVIAKNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRLGLHL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLKGLVTLKKRKEFAHARLHGRTVKSGGLLLQAVDDPGSGSPGCESVRVGFTVSKKSGN
CCCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCC
AVVRNRIKRRLRVAAQNVIAKNAHRGFYYILISSRRLADVGMGELLYSLVTCLRRLGLHL
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA