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The map label for this gene is thiO [H]

Identifier: 88606854

GI number: 88606854

Start: 309262

End: 310320

Strand: Direct

Name: thiO [H]

Synonym: APH_0325

Alternate gene names: 88606854

Gene position: 309262-310320 (Clockwise)

Preceding gene: 88607307

Following gene: 88606797

Centisome position: 21.02

GC content: 42.68

Gene sequence:

>1059_bases
ATGGTAAAAACTGCAGGTATAGCTGGAGCGGGATTGGTAGGGAGAATCTTAGCGCTTGTGTTACTTAGAGATGGGTGGCG
TGTCACTATTTTTGATCGAGATGATACCATAGGCAAGGCAAGTTGTGGCTACATTGCTGCAGGCATGCTTTCTCTATACT
CAGAAGCAGAAAATACAGGTGATTTGGTAATAGACTTAGGATACAGATCCATGGAGCTGTGGCCGCAGATTCTTAGTGAC
ATAGGCGCTGAATTTTGCCTACAGACCTCGGGTAGCGTCATGGTTGCACATGCTGCGGATTTATCAGATCTAGAAATGAA
GTGTGCTATTATCAGGAATAGATTTCCCGATGTGTTTAGTGAATTGCGCATCACTAATAAAGTATACGAGTTAGAAGAAG
GCATTTCAGCCCCCTATGGAATGTATATAAAAGACGAAGGTAGCATTGATAGTATCAATCTCTTTAAGTGCCTGGAGCGC
GCACTCAGGGATTATGGTATTACGTGGTATAGTAACGTCAATGTACTCAAAGTGCAGTGTGCGGAAATTGTTACTGAGCA
GGGATTGCATACGTTTGATTTTGTATTTGATTGTCGAGGGGTAGGTGCAAAATCTGAAGTTGCTGGTTTGCGGGGTGTGC
GAGGAGAAGCAATATTGGTTAAGGCTCCAGGAGTGACTATAAAACGTGCAGTACGCATGATGCACCCTAGATATAGTGTT
TATGTTGTTCCTCGGCAGGAGAACATGTTCATTGTTGGTGCTTCAGAGATAGAGAGTTGTGACTATTCCGAAGTATCAGT
GCAGTCAGCCTTAGAAATGCTTTCAGCGATATACTCACTACATCGAGGATTTGCTGAAGCAAGAATATTAGACATGATGT
CTGCATGTAGGCCGGCCTTCCGTGACAATGTTCCCAGAGTATTAGTGGAGGACAGAGCGATAAGAATAAACGGTTTATAC
AGATATGGTTATCTTTGTGTTCCGGCAATAGTAGAAGAAGTACTGTCATTATTGAACGGTGGCACTTTAAATCACCAAGC
TTTATTTTCCAAAAACTAA

Upstream 100 bases:

>100_bases
CTACAAGAGTCTACCCTTCCTTTAAGGTATTTGCCCGAAAGCAAGTGCTGTGATATCTGTCTCTTGTTATAATTTCCAGC
GGTATGTTTAAAGTAGTTGT

Downstream 100 bases:

>100_bases
GCCAAGTGCTCCACAGGCTGATGAGTAGGTCCATCCTCGCCAACCCCTATGGAGTCATGAGTCATTACGTAAATAGCCTG
AAGAGCCATTAAAGCAGATA

Product: oxidoreductase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVKTAGIAGAGLVGRILALVLLRDGWRVTIFDRDDTIGKASCGYIAAGMLSLYSEAENTGDLVIDLGYRSMELWPQILSD
IGAEFCLQTSGSVMVAHAADLSDLEMKCAIIRNRFPDVFSELRITNKVYELEEGISAPYGMYIKDEGSIDSINLFKCLER
ALRDYGITWYSNVNVLKVQCAEIVTEQGLHTFDFVFDCRGVGAKSEVAGLRGVRGEAILVKAPGVTIKRAVRMMHPRYSV
YVVPRQENMFIVGASEIESCDYSEVSVQSALEMLSAIYSLHRGFAEARILDMMSACRPAFRDNVPRVLVEDRAIRINGLY
RYGYLCVPAIVEEVLSLLNGGTLNHQALFSKN

Sequences:

>Translated_352_residues
MVKTAGIAGAGLVGRILALVLLRDGWRVTIFDRDDTIGKASCGYIAAGMLSLYSEAENTGDLVIDLGYRSMELWPQILSD
IGAEFCLQTSGSVMVAHAADLSDLEMKCAIIRNRFPDVFSELRITNKVYELEEGISAPYGMYIKDEGSIDSINLFKCLER
ALRDYGITWYSNVNVLKVQCAEIVTEQGLHTFDFVFDCRGVGAKSEVAGLRGVRGEAILVKAPGVTIKRAVRMMHPRYSV
YVVPRQENMFIVGASEIESCDYSEVSVQSALEMLSAIYSLHRGFAEARILDMMSACRPAFRDNVPRVLVEDRAIRINGLY
RYGYLCVPAIVEEVLSLLNGGTLNHQALFSKN
>Mature_352_residues
MVKTAGIAGAGLVGRILALVLLRDGWRVTIFDRDDTIGKASCGYIAAGMLSLYSEAENTGDLVIDLGYRSMELWPQILSD
IGAEFCLQTSGSVMVAHAADLSDLEMKCAIIRNRFPDVFSELRITNKVYELEEGISAPYGMYIKDEGSIDSINLFKCLER
ALRDYGITWYSNVNVLKVQCAEIVTEQGLHTFDFVFDCRGVGAKSEVAGLRGVRGEAILVKAPGVTIKRAVRMMHPRYSV
YVVPRQENMFIVGASEIESCDYSEVSVQSALEMLSAIYSLHRGFAEARILDMMSACRPAFRDNVPRVLVEDRAIRINGLY
RYGYLCVPAIVEEVLSLLNGGTLNHQALFSKN

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 38942; Mature: 38942

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTAGIAGAGLVGRILALVLLRDGWRVTIFDRDDTIGKASCGYIAAGMLSLYSEAENTG
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
DLVIDLGYRSMELWPQILSDIGAEFCLQTSGSVMVAHAADLSDLEMKCAIIRNRFPDVFS
CEEEEECCCHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHH
ELRITNKVYELEEGISAPYGMYIKDEGSIDSINLFKCLERALRDYGITWYSNVNVLKVQC
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEHH
AEIVTEQGLHTFDFVFDCRGVGAKSEVAGLRGVRGEAILVKAPGVTIKRAVRMMHPRYSV
HHHHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCEEE
YVVPRQENMFIVGASEIESCDYSEVSVQSALEMLSAIYSLHRGFAEARILDMMSACRPAF
EEEECCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RDNVPRVLVEDRAIRINGLYRYGYLCVPAIVEEVLSLLNGGTLNHQALFSKN
HCCCCEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKTAGIAGAGLVGRILALVLLRDGWRVTIFDRDDTIGKASCGYIAAGMLSLYSEAENTG
CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
DLVIDLGYRSMELWPQILSDIGAEFCLQTSGSVMVAHAADLSDLEMKCAIIRNRFPDVFS
CEEEEECCCHHHHHHHHHHHHCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHH
ELRITNKVYELEEGISAPYGMYIKDEGSIDSINLFKCLERALRDYGITWYSNVNVLKVQC
HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCEEEEHH
AEIVTEQGLHTFDFVFDCRGVGAKSEVAGLRGVRGEAILVKAPGVTIKRAVRMMHPRYSV
HHHHHHCCCCHHHHEEECCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCEEE
YVVPRQENMFIVGASEIESCDYSEVSVQSALEMLSAIYSLHRGFAEARILDMMSACRPAF
EEEECCCCEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RDNVPRVLVEDRAIRINGLYRYGYLCVPAIVEEVLSLLNGGTLNHQALFSKN
HCCCCEEEECCCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]