Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is mltB [H]
Identifier: 87199961
GI number: 87199961
Start: 2059285
End: 2060304
Strand: Reverse
Name: mltB [H]
Synonym: Saro_1944
Alternate gene names: 87199961
Gene position: 2060304-2059285 (Counterclockwise)
Preceding gene: 87199962
Following gene: 87199960
Centisome position: 57.85
GC content: 63.33
Gene sequence:
>1020_bases TTGCGGGCTGGGCTGACAGCCGCCTTGGCGTTGGTTCTGGCGGGCCCCGCAGGTGCACAGGTCGATCAGGAAGAGGCTGG TTTTCAAGGATACCTGCAACTTCTTTCGGCGCGTGCGCGGGGTGAAGGAGTCCGGGAAACCACGATTTCGGCGATGACGT CCGGGCTCACGCTTAACCACCGTGTTATCGAGCTGGATCGCAGCCAGCCTGGGTCCGCGACAGGTCCGATTGCGAACTTC GAACCCTATCGGCGCCAGCATGTCGACGCTGCGCGCATCGCGCGGGGCCGGCGCCAGTTCGCCGCCGCCAGTGGGCAACT TGCGACGATCGAACGGCGTTATGGCGTACCAGGCCCGATCCTTCTGGCGATCTGGGGCCACGAAACAGACTACGGTGGCT ACACTGGAAACTTCGATCTGCCGCGCGCGCTGGCGACCCTGGCCTATGAAGGGCGTCGGCGGGAGTTGTTTGCGGACGAA TTCATCGCTGCCATGAAAATGGTGGACCGGGGCGTGCCGCGATCGAAGTTGGTGGGGAGCTGGGCCGGCGCATTCGGCAA TCCGCAGTTCCTTCCTTCGGTCTATCTGCGCGTGGCGCAGGACGGGGATGGCGACGGCTTCGCGGATATCTGGACCAGCC GCGCGGACACATTGGCGTCTATCGCCAACTATTTCCGCGATGCGGGATGGCGACCGGGCCAGCCCTGGGGCGTGGCGGTA ACGGTGCCGGCGGACCTCGATCGCTCGAGCCTAGGTACGACGCTGCGGAGCCCGCGCTGTCCCCGGGTTTTCGAACGCCA TTCGGGCTGGAAGACCATGCGCGAATGGCGCGCGCTGGGTATTGCGCCAAAGTTCGGGGCATGGCCAGGCGACGATGTGC TGGCTAGTCTGCTCGAACCCGATGGGCAGGGCAGGACTGCCTACCTGCTAACCGGAAATTATAGGGTTATCCTCGATTAC AACTGCTCGAACTTTTACGCTTTGTCCGTGGGACTTCTTGCAGATGAGATCAGCCGTTAG
Upstream 100 bases:
>100_bases TTCGCCGTTAGCGCCTTCCACATCGGTCGCAAAGGGGATTCCCATCCGGAAGTATCCGTGCGAGACAGGTTTGATGATTT TTTCGATGGGTAAGAGAGGT
Downstream 100 bases:
>100_bases CCATATCGCGATTGCGACGACCCTGTTGCTTGCTGCCTGCGGCGGTGCAGACGCCCGCGTTTTCGGGCCGTCTGTCGACA TCATTCGCGGGCCGGCGGGC
Product: lytic murein transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MRAGLTAALALVLAGPAGAQVDQEEAGFQGYLQLLSARARGEGVRETTISAMTSGLTLNHRVIELDRSQPGSATGPIANF EPYRRQHVDAARIARGRRQFAAASGQLATIERRYGVPGPILLAIWGHETDYGGYTGNFDLPRALATLAYEGRRRELFADE FIAAMKMVDRGVPRSKLVGSWAGAFGNPQFLPSVYLRVAQDGDGDGFADIWTSRADTLASIANYFRDAGWRPGQPWGVAV TVPADLDRSSLGTTLRSPRCPRVFERHSGWKTMREWRALGIAPKFGAWPGDDVLASLLEPDGQGRTAYLLTGNYRVILDY NCSNFYALSVGLLADEISR
Sequences:
>Translated_339_residues MRAGLTAALALVLAGPAGAQVDQEEAGFQGYLQLLSARARGEGVRETTISAMTSGLTLNHRVIELDRSQPGSATGPIANF EPYRRQHVDAARIARGRRQFAAASGQLATIERRYGVPGPILLAIWGHETDYGGYTGNFDLPRALATLAYEGRRRELFADE FIAAMKMVDRGVPRSKLVGSWAGAFGNPQFLPSVYLRVAQDGDGDGFADIWTSRADTLASIANYFRDAGWRPGQPWGVAV TVPADLDRSSLGTTLRSPRCPRVFERHSGWKTMREWRALGIAPKFGAWPGDDVLASLLEPDGQGRTAYLLTGNYRVILDY NCSNFYALSVGLLADEISR >Mature_339_residues MRAGLTAALALVLAGPAGAQVDQEEAGFQGYLQLLSARARGEGVRETTISAMTSGLTLNHRVIELDRSQPGSATGPIANF EPYRRQHVDAARIARGRRQFAAASGQLATIERRYGVPGPILLAIWGHETDYGGYTGNFDLPRALATLAYEGRRRELFADE FIAAMKMVDRGVPRSKLVGSWAGAFGNPQFLPSVYLRVAQDGDGDGFADIWTSRADTLASIANYFRDAGWRPGQPWGVAV TVPADLDRSSLGTTLRSPRCPRVFERHSGWKTMREWRALGIAPKFGAWPGDDVLASLLEPDGQGRTAYLLTGNYRVILDY NCSNFYALSVGLLADEISR
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=301, Percent_Identity=27.906976744186, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 36923; Mature: 36923
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAGLTAALALVLAGPAGAQVDQEEAGFQGYLQLLSARARGEGVRETTISAMTSGLTLNH CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECC RVIELDRSQPGSATGPIANFEPYRRQHVDAARIARGRRQFAAASGQLATIERRYGVPGPI EEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCE LLAIWGHETDYGGYTGNFDLPRALATLAYEGRRRELFADEFIAAMKMVDRGVPRSKLVGS EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WAGAFGNPQFLPSVYLRVAQDGDGDGFADIWTSRADTLASIANYFRDAGWRPGQPWGVAV HHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE TVPADLDRSSLGTTLRSPRCPRVFERHSGWKTMREWRALGIAPKFGAWPGDDVLASLLEP EECCCCCHHHHCCHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC DGQGRTAYLLTGNYRVILDYNCSNFYALSVGLLADEISR CCCCCEEEEEECCEEEEEEECCCCEEEEEHHHHHHHHCC >Mature Secondary Structure MRAGLTAALALVLAGPAGAQVDQEEAGFQGYLQLLSARARGEGVRETTISAMTSGLTLNH CCCCHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEECC RVIELDRSQPGSATGPIANFEPYRRQHVDAARIARGRRQFAAASGQLATIERRYGVPGPI EEEEECCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCE LLAIWGHETDYGGYTGNFDLPRALATLAYEGRRRELFADEFIAAMKMVDRGVPRSKLVGS EEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH WAGAFGNPQFLPSVYLRVAQDGDGDGFADIWTSRADTLASIANYFRDAGWRPGQPWGVAV HHCCCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE TVPADLDRSSLGTTLRSPRCPRVFERHSGWKTMREWRALGIAPKFGAWPGDDVLASLLEP EECCCCCHHHHCCHHCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCC DGQGRTAYLLTGNYRVILDYNCSNFYALSVGLLADEISR CCCCCEEEEEECCEEEEEEECCCCEEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]