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The map label for this gene is rlpA [H]

Identifier: 87199960

GI number: 87199960

Start: 2058390

End: 2059301

Strand: Reverse

Name: rlpA [H]

Synonym: Saro_1943

Alternate gene names: 87199960

Gene position: 2059301-2058390 (Counterclockwise)

Preceding gene: 87199961

Following gene: 87199959

Centisome position: 57.82

GC content: 66.01

Gene sequence:

>912_bases
ATGAGATCAGCCGTTAGCCATATCGCGATTGCGACGACCCTGTTGCTTGCTGCCTGCGGCGGTGCAGACGCCCGCGTTTT
CGGGCCGTCTGTCGACATCATTCGCGGGCCGGCGGGCGACTATCCGATGGTTCTTGGCGCCCCGTTCCAGGTCGATGGCG
TCACCTATACGCCGGCAGATACATTGAATTACGATTCGGTGGGCTACGCTTCGCAGGCCGAGGGGGAAGGGATCAGCGGT
GCACACCGCACCTTGCCGCTACCCAGCTACGTCGAAGTGACATCGCTCGAAACAGGCAGGACAATCCTGGTCCGATTGAC
CCGGCGCGGACCGATGACTGGTAACGACGTCGTCTCGCTTGCACCGGGCGCGTGGATGCAACTGGGGGCCGGGGCTTCCG
ATAGGGTGCCGGTGCGGGTGCGCAGGGTCAATCCGCCCGAAGCAGAGCGTGCTCTGCTTCGCGACGGGGCGCAGGCTCCG
GTCAGGATGGACACCCCGCCGGGATTGCTTGCGGCGCTGAAGCGAAAGCTGGGGCTAGTTGTGGCACCGCCCGTCCTGCC
GTCGACACTGCCAGTGGCTGCGGCAGGCGCTTTGGGTTCCACACCGACCGCCTTGCCGTCATCGATGCCGATCCCGCAAG
CGAAGACCGCGGTGAAGCCTCGAAGTGCTCCTCGGGCCAAGGCTTCAGCGCCGGTCGGGGCGGGGCATGGATTGTTCGTG
CAGGCGGGCGCCTATTCCACGCGCGAACGTGCTGAAAAGGTTGCGCGGGCGCTGGGCGGTACAGCAACCTCAGGGGGCAA
AGTCTGGCGTGTGCGAACCGGGCCACACAAGGATCGTGGACAAGCTGACGCGGCGCTGGCGAAGGTGCGCGCGGCGGGCT
ATGCCGACGCGAGGGTCGTCGCTGCTCCTTGA

Upstream 100 bases:

>100_bases
GGGCAGGGCAGGACTGCCTACCTGCTAACCGGAAATTATAGGGTTATCCTCGATTACAACTGCTCGAACTTTTACGCTTT
GTCCGTGGGACTTCTTGCAG

Downstream 100 bases:

>100_bases
GCCCTGGTGCGGCGGCTCCGTGTGACCGGGGAATGCCTTTTGCGCCTGAAGTTCGTTGCCGTCGCCGCTGGATTGATTGT
GGGCGCCATGCCGGTACAGG

Product: sporulation-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRSAVSHIAIATTLLLAACGGADARVFGPSVDIIRGPAGDYPMVLGAPFQVDGVTYTPADTLNYDSVGYASQAEGEGISG
AHRTLPLPSYVEVTSLETGRTILVRLTRRGPMTGNDVVSLAPGAWMQLGAGASDRVPVRVRRVNPPEAERALLRDGAQAP
VRMDTPPGLLAALKRKLGLVVAPPVLPSTLPVAAAGALGSTPTALPSSMPIPQAKTAVKPRSAPRAKASAPVGAGHGLFV
QAGAYSTRERAEKVARALGGTATSGGKVWRVRTGPHKDRGQADAALAKVRAAGYADARVVAAP

Sequences:

>Translated_303_residues
MRSAVSHIAIATTLLLAACGGADARVFGPSVDIIRGPAGDYPMVLGAPFQVDGVTYTPADTLNYDSVGYASQAEGEGISG
AHRTLPLPSYVEVTSLETGRTILVRLTRRGPMTGNDVVSLAPGAWMQLGAGASDRVPVRVRRVNPPEAERALLRDGAQAP
VRMDTPPGLLAALKRKLGLVVAPPVLPSTLPVAAAGALGSTPTALPSSMPIPQAKTAVKPRSAPRAKASAPVGAGHGLFV
QAGAYSTRERAEKVARALGGTATSGGKVWRVRTGPHKDRGQADAALAKVRAAGYADARVVAAP
>Mature_303_residues
MRSAVSHIAIATTLLLAACGGADARVFGPSVDIIRGPAGDYPMVLGAPFQVDGVTYTPADTLNYDSVGYASQAEGEGISG
AHRTLPLPSYVEVTSLETGRTILVRLTRRGPMTGNDVVSLAPGAWMQLGAGASDRVPVRVRRVNPPEAERALLRDGAQAP
VRMDTPPGLLAALKRKLGLVVAPPVLPSTLPVAAAGALGSTPTALPSSMPIPQAKTAVKPRSAPRAKASAPVGAGHGLFV
QAGAYSTRERAEKVARALGGTATSGGKVWRVRTGPHKDRGQADAALAKVRAAGYADARVVAAP

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 30992; Mature: 30992

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAVSHIAIATTLLLAACGGADARVFGPSVDIIRGPAGDYPMVLGAPFQVDGVTYTPAD
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCEEEECCEEECCEEECCCC
TLNYDSVGYASQAEGEGISGAHRTLPLPSYVEVTSLETGRTILVRLTRRGPMTGNDVVSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEE
APGAWMQLGAGASDRVPVRVRRVNPPEAERALLRDGAQAPVRMDTPPGLLAALKRKLGLV
CCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCEE
VAPPVLPSTLPVAAAGALGSTPTALPSSMPIPQAKTAVKPRSAPRAKASAPVGAGHGLFV
EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEE
QAGAYSTRERAEKVARALGGTATSGGKVWRVRTGPHKDRGQADAALAKVRAAGYADARVV
ECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEE
AAP
ECC
>Mature Secondary Structure
MRSAVSHIAIATTLLLAACGGADARVFGPSVDIIRGPAGDYPMVLGAPFQVDGVTYTPAD
CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCCCEEEECCEEECCEEECCCC
TLNYDSVGYASQAEGEGISGAHRTLPLPSYVEVTSLETGRTILVRLTRRGPMTGNDVVSL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEE
APGAWMQLGAGASDRVPVRVRRVNPPEAERALLRDGAQAPVRMDTPPGLLAALKRKLGLV
CCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCEE
VAPPVLPSTLPVAAAGALGSTPTALPSSMPIPQAKTAVKPRSAPRAKASAPVGAGHGLFV
EECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEE
QAGAYSTRERAEKVARALGGTATSGGKVWRVRTGPHKDRGQADAALAKVRAAGYADARVV
ECCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEE
AAP
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]