Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199850
Identifier: 87199850
GI number: 87199850
Start: 1932309
End: 1932746
Strand: Reverse
Name: 87199850
Synonym: Saro_1833
Alternate gene names: NA
Gene position: 1932746-1932309 (Counterclockwise)
Preceding gene: 87199851
Following gene: 87199849
Centisome position: 54.27
GC content: 65.75
Gene sequence:
>438_bases ATGCATTCCGCACAGGACCTGATCGCCATCCTCGACCTATCCGCGCACCCGGAAGGCGGCTGGTTCAGGGAGACATGGCG AGCCACCGCCGCCGCCGATGGAAGAGCGACGAGCACAGCGATCATATTCCTCCTGCAGGCAGAAAAGCGATCGCACTGGC ACGCCGTTGATGCCGACGAGATCTGGGTCTGGCAAGGCGGGGATCCTCTGGCGCTGCACGTCGCTTCGACCGGCGATGAA CAGCCCGCAACGACAATTCTGGGCAACAATCCCGAGGCCGGCCACTCGCTCAATGCCGTCGTCCCCGCCGCGCAGTGGCA GGCGGCAGAGCCACTTTCCGGACCGCACGGCTACGCCCTTGTCTCGTGCATCGTCGCGCCGGGGTTCGATTTCGGAGGCT TCACCCTTGCCCCGCCGGGATGGAAGCCGGGCGCATGA
Upstream 100 bases:
>100_bases ATCGCGGATCTTGGATGGACGCCGCTCGAACCGGCAAAGGTCGAAACCTGCCCCGCCCAGTGGTGATTGACACTGATCGC CGCGGACGCAATCGTACACC
Downstream 100 bases:
>100_bases CCCGCTCTATCGCACGGATCGCGCTGGCCCTGTTCTACCTGCTCGCTGGCGTGCTGCACCTGGCCATTCCCCGCCCTTTC CTGTCGATCGTCCCGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MHSAQDLIAILDLSAHPEGGWFRETWRATAAADGRATSTAIIFLLQAEKRSHWHAVDADEIWVWQGGDPLALHVASTGDE QPATTILGNNPEAGHSLNAVVPAAQWQAAEPLSGPHGYALVSCIVAPGFDFGGFTLAPPGWKPGA
Sequences:
>Translated_145_residues MHSAQDLIAILDLSAHPEGGWFRETWRATAAADGRATSTAIIFLLQAEKRSHWHAVDADEIWVWQGGDPLALHVASTGDE QPATTILGNNPEAGHSLNAVVPAAQWQAAEPLSGPHGYALVSCIVAPGFDFGGFTLAPPGWKPGA >Mature_145_residues MHSAQDLIAILDLSAHPEGGWFRETWRATAAADGRATSTAIIFLLQAEKRSHWHAVDADEIWVWQGGDPLALHVASTGDE QPATTILGNNPEAGHSLNAVVPAAQWQAAEPLSGPHGYALVSCIVAPGFDFGGFTLAPPGWKPGA
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15282; Mature: 15282
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSAQDLIAILDLSAHPEGGWFRETWRATAAADGRATSTAIIFLLQAEKRSHWHAVDADE CCCHHHEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEECCCCC IWVWQGGDPLALHVASTGDEQPATTILGNNPEAGHSLNAVVPAAQWQAAEPLSGPHGYAL EEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH VSCIVAPGFDFGGFTLAPPGWKPGA HEEHHHCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MHSAQDLIAILDLSAHPEGGWFRETWRATAAADGRATSTAIIFLLQAEKRSHWHAVDADE CCCHHHEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEECCCCC IWVWQGGDPLALHVASTGDEQPATTILGNNPEAGHSLNAVVPAAQWQAAEPLSGPHGYAL EEEEECCCEEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHH VSCIVAPGFDFGGFTLAPPGWKPGA HEEHHHCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA