Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199851
Identifier: 87199851
GI number: 87199851
Start: 1932781
End: 1933176
Strand: Reverse
Name: 87199851
Synonym: Saro_1834
Alternate gene names: NA
Gene position: 1933176-1932781 (Counterclockwise)
Preceding gene: 87199852
Following gene: 87199850
Centisome position: 54.28
GC content: 65.15
Gene sequence:
>396_bases TTGCCTGCTCCCCGCCCCATCACCCCCCGGATCCTGACCATGACCACGGGCTGGAAGCTCGCGCCTGAAAGCCGGAACGC GCTTCTGGCAGTACATCCGCCACGATATCCACGTGCGATTGCAGACCATGTCACGCTGACAGTGTCGTCGTCGTGCCCGC TGCCACCGGCGCAAACCGACGTTCGCATCGTCGGGCGGTCGGACGACGGCAAGGGGGTGGAAGCGATGGTCGTCGCGATC GACGGCTCCACGCGACGCCCCGACGGAATGGTCTGGCACATCACATGGTCGCTCGACGAAACGCGAACTGCGCGGGAAAG CAACGACGTGATCGCGGATCTTGGATGGACGCCGCTCGAACCGGCAAAGGTCGAAACCTGCCCCGCCCAGTGGTGA
Upstream 100 bases:
>100_bases GCCTGTTCCTCGCGATCGGCGCATTGACCATCATCTGGGTGACCGGCGCCCTTGTCACGCCGCGTTAAGTCACCCTCCGC TTGAAAGGGCGGGGAACGGA
Downstream 100 bases:
>100_bases TTGACACTGATCGCCGCGGACGCAATCGTACACCATGCATTCCGCACAGGACCTGATCGCCATCCTCGACCTATCCGCGC ACCCGGAAGGCGGCTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MPAPRPITPRILTMTTGWKLAPESRNALLAVHPPRYPRAIADHVTLTVSSSCPLPPAQTDVRIVGRSDDGKGVEAMVVAI DGSTRRPDGMVWHITWSLDETRTARESNDVIADLGWTPLEPAKVETCPAQW
Sequences:
>Translated_131_residues MPAPRPITPRILTMTTGWKLAPESRNALLAVHPPRYPRAIADHVTLTVSSSCPLPPAQTDVRIVGRSDDGKGVEAMVVAI DGSTRRPDGMVWHITWSLDETRTARESNDVIADLGWTPLEPAKVETCPAQW >Mature_130_residues PAPRPITPRILTMTTGWKLAPESRNALLAVHPPRYPRAIADHVTLTVSSSCPLPPAQTDVRIVGRSDDGKGVEAMVVAID GSTRRPDGMVWHITWSLDETRTARESNDVIADLGWTPLEPAKVETCPAQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14345; Mature: 14213
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPRPITPRILTMTTGWKLAPESRNALLAVHPPRYPRAIADHVTLTVSSSCPLPPAQTD CCCCCCCCCEEEEEECCCEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC VRIVGRSDDGKGVEAMVVAIDGSTRRPDGMVWHITWSLDETRTARESNDVIADLGWTPLE EEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCC PAKVETCPAQW CCCCCCCCCCC >Mature Secondary Structure PAPRPITPRILTMTTGWKLAPESRNALLAVHPPRYPRAIADHVTLTVSSSCPLPPAQTD CCCCCCCCEEEEEECCCEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCC VRIVGRSDDGKGVEAMVVAIDGSTRRPDGMVWHITWSLDETRTARESNDVIADLGWTPLE EEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCC PAKVETCPAQW CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA