Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199849
Identifier: 87199849
GI number: 87199849
Start: 1931908
End: 1932312
Strand: Reverse
Name: 87199849
Synonym: Saro_1832
Alternate gene names: NA
Gene position: 1932312-1931908 (Counterclockwise)
Preceding gene: 87199850
Following gene: 87199848
Centisome position: 54.25
GC content: 66.67
Gene sequence:
>405_bases ATGACCCGCTCTATCGCACGGATCGCGCTGGCCCTGTTCTACCTGCTCGCTGGCGTGCTGCACCTGGCCATTCCCCGCCC TTTCCTGTCGATCGTCCCGGGCTGGGTGCCATTCCCGCAGACCGTCGTCTTCTGGACCGGCATTGCAGAAGTCCTTGGCG CCCTCACCCTGGCACAGCCCTGGTCGCCCAGCCTGCGCAAGCTGGCAGGAGCGGGTCTCGCCGCCTATGCGGTCTGCGTC TTCCCGGGCAATATCAACCACTTCATGATGGACATGGCCCGTCCCGACGGCGGGTTGGGTCTGGCCTATCACGTACCCCG CATGTTCGTGCAGCCGGTGCTGGTGTGGCTGGCCCTCTGGACCGGCGGGTTGACGAACTGGCCGGCGACGGCAAGACCGC GCTGA
Upstream 100 bases:
>100_bases TTTCCGGACCGCACGGCTACGCCCTTGTCTCGTGCATCGTCGCGCCGGGGTTCGATTTCGGAGGCTTCACCCTTGCCCCG CCGGGATGGAAGCCGGGCGC
Downstream 100 bases:
>100_bases ACGCATGCTCCTGTCAGATCCCACCACTCTCGCCGCCTGCGCGCTCGCTGTCATCCTTGTGGGCATGGCCAAGGGCGGGT TTTCCGGCCTCGGCGCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MTRSIARIALALFYLLAGVLHLAIPRPFLSIVPGWVPFPQTVVFWTGIAEVLGALTLAQPWSPSLRKLAGAGLAAYAVCV FPGNINHFMMDMARPDGGLGLAYHVPRMFVQPVLVWLALWTGGLTNWPATARPR
Sequences:
>Translated_134_residues MTRSIARIALALFYLLAGVLHLAIPRPFLSIVPGWVPFPQTVVFWTGIAEVLGALTLAQPWSPSLRKLAGAGLAAYAVCV FPGNINHFMMDMARPDGGLGLAYHVPRMFVQPVLVWLALWTGGLTNWPATARPR >Mature_133_residues TRSIARIALALFYLLAGVLHLAIPRPFLSIVPGWVPFPQTVVFWTGIAEVLGALTLAQPWSPSLRKLAGAGLAAYAVCVF PGNINHFMMDMARPDGGLGLAYHVPRMFVQPVLVWLALWTGGLTNWPATARPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14591; Mature: 14459
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSIARIALALFYLLAGVLHLAIPRPFLSIVPGWVPFPQTVVFWTGIAEVLGALTLAQP CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WSPSLRKLAGAGLAAYAVCVFPGNINHFMMDMARPDGGLGLAYHVPRMFVQPVLVWLALW CCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH TGGLTNWPATARPR HCCCCCCCCCCCCC >Mature Secondary Structure TRSIARIALALFYLLAGVLHLAIPRPFLSIVPGWVPFPQTVVFWTGIAEVLGALTLAQP CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC WSPSLRKLAGAGLAAYAVCVFPGNINHFMMDMARPDGGLGLAYHVPRMFVQPVLVWLALW CCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH TGGLTNWPATARPR HCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA