Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199794
Identifier: 87199794
GI number: 87199794
Start: 1874166
End: 1875185
Strand: Reverse
Name: 87199794
Synonym: Saro_1777
Alternate gene names: NA
Gene position: 1875185-1874166 (Counterclockwise)
Preceding gene: 87199795
Following gene: 87199793
Centisome position: 52.65
GC content: 64.71
Gene sequence:
>1020_bases GTGGTGGCAAGACCGGAAGTGTCGAAGCCTTGCCTTGCAGCAAGCGTCTTCGCCCTTGCACTGTGCCTCGGTGCATGCGG CGGAAGCGACGACAGCTCGTCCACCGCGACGACGGTAACGCCCACCCCCTCGCCGACGCCGACCGCCACCCCGACGCCAA CGCCCACGGCCACCGGGACGGCTTATTCAACGGCATCGGTCGATTGCCCCTACAGCGGGACCTATACCGGCACCTACAGC ACCTCGGGCACGCTGTCGGCATCATGGAACTGGTCTTGCAGCGGCACCACGCGGTCGATGACGGGCACGGGACTGCCAGA CCACGCCGTCGGGACCTTCCCGAACAGCAACAACCCCAACGCCATCGCATCGCAATCGATCAGCGCATCGATGACGGCCG CTCCGACGCTCACCACCACGGCGACCAGTGTCAACTACGCCGGCTACATGCGCAACAGCGTGAAGATCGAGGCCGCGACC AACGCCACCTGCCCTTCGAGCGCTACCGGCACCAGCCAGTGCTCGGCCGATGGCGGCGGCTATGCGTGGAAGGTCGAGGC GCTGGGCCAATCGGTCTTCAGCCTCGGGCTCGACAGCAACAACGCCCACGTCCAGCCCGGCGGTGTCTACCATTACCACG GCGTGCCCGAGGGCTTGCTGACCAACGCCGGCGTATCCGACAGCAACCGGAAGATGCTGCTCGTGGGCTGGGCGCTCGAC GGTTTCCCGATCTACGCGCGCTATTGCTACACGACCGCAACCGACGCGAGCAGCGCAGTCAAGAAATGCGCCTCGAGCTA CGTTCTCGATACGACTGCAGACACGGACCGGCCGTCAACCTCGTGGTTCCCGCTTGGCACGTTCACTTCAGACTACAGCT ACGTCGCCGGTTCCGGGGACCTGGATGAGTGCAACGGTCGAACGGGGGTCACTCCGGAGTTTCCTGACGGCATCTACTAT TACGTCGTGACCGACGAGTTTCCCTTCATGGGGCGCTGCGTGAAGGGCTCGACGAGTTGA
Upstream 100 bases:
>100_bases GAGAAATAGTTCCGGATCGGACCCTTCGTCCGAAATCCACATTTGATCCATCATCGCCGCATACGTCCGTCGCAGGATTT CGTGACGGGAGAGATGGACT
Downstream 100 bases:
>100_bases ACAGGCAACCGCCCGGCAGAACGTTCGGGTCGAAACGTCTTTCCAAGCCCATCGGGTCGCACTGCTGGGAGGGGGGACAA CAAGGAACCGGTCGCACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MVARPEVSKPCLAASVFALALCLGACGGSDDSSSTATTVTPTPSPTPTATPTPTPTATGTAYSTASVDCPYSGTYTGTYS TSGTLSASWNWSCSGTTRSMTGTGLPDHAVGTFPNSNNPNAIASQSISASMTAAPTLTTTATSVNYAGYMRNSVKIEAAT NATCPSSATGTSQCSADGGGYAWKVEALGQSVFSLGLDSNNAHVQPGGVYHYHGVPEGLLTNAGVSDSNRKMLLVGWALD GFPIYARYCYTTATDASSAVKKCASSYVLDTTADTDRPSTSWFPLGTFTSDYSYVAGSGDLDECNGRTGVTPEFPDGIYY YVVTDEFPFMGRCVKGSTS
Sequences:
>Translated_339_residues MVARPEVSKPCLAASVFALALCLGACGGSDDSSSTATTVTPTPSPTPTATPTPTPTATGTAYSTASVDCPYSGTYTGTYS TSGTLSASWNWSCSGTTRSMTGTGLPDHAVGTFPNSNNPNAIASQSISASMTAAPTLTTTATSVNYAGYMRNSVKIEAAT NATCPSSATGTSQCSADGGGYAWKVEALGQSVFSLGLDSNNAHVQPGGVYHYHGVPEGLLTNAGVSDSNRKMLLVGWALD GFPIYARYCYTTATDASSAVKKCASSYVLDTTADTDRPSTSWFPLGTFTSDYSYVAGSGDLDECNGRTGVTPEFPDGIYY YVVTDEFPFMGRCVKGSTS >Mature_339_residues MVARPEVSKPCLAASVFALALCLGACGGSDDSSSTATTVTPTPSPTPTATPTPTPTATGTAYSTASVDCPYSGTYTGTYS TSGTLSASWNWSCSGTTRSMTGTGLPDHAVGTFPNSNNPNAIASQSISASMTAAPTLTTTATSVNYAGYMRNSVKIEAAT NATCPSSATGTSQCSADGGGYAWKVEALGQSVFSLGLDSNNAHVQPGGVYHYHGVPEGLLTNAGVSDSNRKMLLVGWALD GFPIYARYCYTTATDASSAVKKCASSYVLDTTADTDRPSTSWFPLGTFTSDYSYVAGSGDLDECNGRTGVTPEFPDGIYY YVVTDEFPFMGRCVKGSTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34898; Mature: 34898
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARPEVSKPCLAASVFALALCLGACGGSDDSSSTATTVTPTPSPTPTATPTPTPTATGT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC AYSTASVDCPYSGTYTGTYSTSGTLSASWNWSCSGTTRSMTGTGLPDHAVGTFPNSNNPN EEEEEECCCCCCCEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCEECCCCCCCCC AIASQSISASMTAAPTLTTTATSVNYAGYMRNSVKIEAATNATCPSSATGTSQCSADGGG CEECCCCCCCEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCC YAWKVEALGQSVFSLGLDSNNAHVQPGGVYHYHGVPEGLLTNAGVSDSNRKMLLVGWALD EEEEHHHHCCHHHEECCCCCCCEECCCCEEEECCCCCHHHCCCCCCCCCCEEEEEEEEEC GFPIYARYCYTTATDASSAVKKCASSYVLDTTADTDRPSTSWFPLGTFTSDYSYVAGSGD CCEEEEEEEEECCCCHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCCCCCCEEECCCC LDECNGRTGVTPEFPDGIYYYVVTDEFPFMGRCVKGSTS HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCC >Mature Secondary Structure MVARPEVSKPCLAASVFALALCLGACGGSDDSSSTATTVTPTPSPTPTATPTPTPTATGT CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC AYSTASVDCPYSGTYTGTYSTSGTLSASWNWSCSGTTRSMTGTGLPDHAVGTFPNSNNPN EEEEEECCCCCCCEEEEEECCCCEEEECCEEEECCCCCCCCCCCCCCCCEECCCCCCCCC AIASQSISASMTAAPTLTTTATSVNYAGYMRNSVKIEAATNATCPSSATGTSQCSADGGG CEECCCCCCCEECCCEEEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCC YAWKVEALGQSVFSLGLDSNNAHVQPGGVYHYHGVPEGLLTNAGVSDSNRKMLLVGWALD EEEEHHHHCCHHHEECCCCCCCEECCCCEEEECCCCCHHHCCCCCCCCCCEEEEEEEEEC GFPIYARYCYTTATDASSAVKKCASSYVLDTTADTDRPSTSWFPLGTFTSDYSYVAGSGD CCEEEEEEEEECCCCHHHHHHHHHHCEEEECCCCCCCCCCCEEECCCCCCCCCEEECCCC LDECNGRTGVTPEFPDGIYYYVVTDEFPFMGRCVKGSTS HHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA