Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199793

Identifier: 87199793

GI number: 87199793

Start: 1873372

End: 1874169

Strand: Reverse

Name: 87199793

Synonym: Saro_1776

Alternate gene names: NA

Gene position: 1874169-1873372 (Counterclockwise)

Preceding gene: 87199794

Following gene: 87199790

Centisome position: 52.62

GC content: 65.29

Gene sequence:

>798_bases
TTGAACAGGCAACCGCCCGGCAGAACGTTCGGGTCGAAACGTCTTTCCAAGCCCATCGGGTCGCACTGCTGGGAGGGGGG
ACAACAAGGAACCGGTCGCACCGGTCCATGGGGAAAGTGGCGGGCATCGTTCCACCTTTCCCAACCTGGCCGCCCGCCGC
GCTCTTTTCGCACCCTACGCGGCGGTGCGGCCACTTTCTTTTTCCTGCGCGCGGCAGCATTGCTGGTGGCGGCATTGTTC
GCAATAGCGGCCACCAGTCCGGCCACCGCCCACGCACTCCCGCCGGCAACGGCAACCATCAATCTCGTCGGCGATCGTGC
CTATGTCGCGGCGGCTGTCCCGCTGGAGATGGTGCCGCGTGTCGACACCAATCGCGACGGGCTGATCGATGCGCGTGAAG
CAGAGGTCAGCGGCGCTGCGTTCGAAGAAGCGCTTCTGTCGCGCCTCTGGCTGCGGACTGCATCGGGCAACGCCAGCTTC
GTCTTCGCCTTCACCCCCGGCGACACCGAACCCTCGCCCTACGTGGTCGTCATGGCGGGCTTCCAGCTTCGGGACAGCAG
CGGCCCCCTCACCGTCCGGACCCGCCTCGGATCGGAAGCGTTGCCGGTGCAGTTCAAGGTCAGCCGCGGGAAGGAACTGG
AGAACCTGACCGTCTCCGCGTCGGACGAAACGCACACCTTCCTGACATCCGGAACCTACCAAACCGCGCGGGACCGCAAG
GTGTTCGTCGTCATCGTGGTGCTTGCCGGCACCTTGACTATCCTCGCCGTTCTCCTTCTGCTTTCAGGCCGACGCTGA

Upstream 100 bases:

>100_bases
GTCGAACGGGGGTCACTCCGGAGTTTCCTGACGGCATCTACTATTACGTCGTGACCGACGAGTTTCCCTTCATGGGGCGC
TGCGTGAAGGGCTCGACGAG

Downstream 100 bases:

>100_bases
AGCGGTAGCCCAGGCCATAGACGGTTGCGATGCAGGCCCCGCCCGGATCGATCGCCAGGATCTTGCGCCGAATGTTCTTG
ATATGGCTGTCGACGGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNRQPPGRTFGSKRLSKPIGSHCWEGGQQGTGRTGPWGKWRASFHLSQPGRPPRSFRTLRGGAATFFFLRAAALLVAALF
AIAATSPATAHALPPATATINLVGDRAYVAAAVPLEMVPRVDTNRDGLIDAREAEVSGAAFEEALLSRLWLRTASGNASF
VFAFTPGDTEPSPYVVVMAGFQLRDSSGPLTVRTRLGSEALPVQFKVSRGKELENLTVSASDETHTFLTSGTYQTARDRK
VFVVIVVLAGTLTILAVLLLLSGRR

Sequences:

>Translated_265_residues
MNRQPPGRTFGSKRLSKPIGSHCWEGGQQGTGRTGPWGKWRASFHLSQPGRPPRSFRTLRGGAATFFFLRAAALLVAALF
AIAATSPATAHALPPATATINLVGDRAYVAAAVPLEMVPRVDTNRDGLIDAREAEVSGAAFEEALLSRLWLRTASGNASF
VFAFTPGDTEPSPYVVVMAGFQLRDSSGPLTVRTRLGSEALPVQFKVSRGKELENLTVSASDETHTFLTSGTYQTARDRK
VFVVIVVLAGTLTILAVLLLLSGRR
>Mature_265_residues
MNRQPPGRTFGSKRLSKPIGSHCWEGGQQGTGRTGPWGKWRASFHLSQPGRPPRSFRTLRGGAATFFFLRAAALLVAALF
AIAATSPATAHALPPATATINLVGDRAYVAAAVPLEMVPRVDTNRDGLIDAREAEVSGAAFEEALLSRLWLRTASGNASF
VFAFTPGDTEPSPYVVVMAGFQLRDSSGPLTVRTRLGSEALPVQFKVSRGKELENLTVSASDETHTFLTSGTYQTARDRK
VFVVIVVLAGTLTILAVLLLLSGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28378; Mature: 28378

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQPPGRTFGSKRLSKPIGSHCWEGGQQGTGRTGPWGKWRASFHLSQPGRPPRSFRTLR
CCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHC
GGAATFFFLRAAALLVAALFAIAATSPATAHALPPATATINLVGDRAYVAAAVPLEMVPR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHCCC
VDTNRDGLIDAREAEVSGAAFEEALLSRLWLRTASGNASFVFAFTPGDTEPSPYVVVMAG
CCCCCCCCEECHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEC
FQLRDSSGPLTVRTRLGSEALPVQFKVSRGKELENLTVSASDETHTFLTSGTYQTARDRK
EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCE
VFVVIVVLAGTLTILAVLLLLSGRR
EEEEHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRQPPGRTFGSKRLSKPIGSHCWEGGQQGTGRTGPWGKWRASFHLSQPGRPPRSFRTLR
CCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHC
GGAATFFFLRAAALLVAALFAIAATSPATAHALPPATATINLVGDRAYVAAAVPLEMVPR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHCCC
VDTNRDGLIDAREAEVSGAAFEEALLSRLWLRTASGNASFVFAFTPGDTEPSPYVVVMAG
CCCCCCCCEECHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEC
FQLRDSSGPLTVRTRLGSEALPVQFKVSRGKELENLTVSASDETHTFLTSGTYQTARDRK
EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCE
VFVVIVVLAGTLTILAVLLLLSGRR
EEEEHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA