Click here to switch to the map view.

The map label for this gene is 87199701

Identifier: 87199701

GI number: 87199701

Start: 1768599

End: 1769282

Strand: Reverse

Name: 87199701

Synonym: Saro_1684

Alternate gene names: NA

Gene position: 1769282-1768599 (Counterclockwise)

Preceding gene: 87199713

Following gene: 87199699

Centisome position: 49.68

GC content: 60.82

Gene sequence:

>684_bases
ATGTATCAAAAGGAAGATGCGCCAAAATTCGTGACCGACATGATCATGCCGGAACGCGAAGGGGGGTATCTGAAGGGTCA
CGAGACCCGAGAGCTGATCCTGCGTACCGCCCTCACCATCCTGATCGAGGAAGGTTACCGGGCCATGTCGATGCGCCGAG
TCGCGGCGGCCTGCGACTTGAAATTCGGCAACCTTACCTACCACTATCGCAGCCGCGAGGACCTGGTCCGGGCGATGATG
GACGCGGTGATCCGCAGCTACGAGATCGAGTTCGAGGACATCATGCACATGCCCGGGGTCCCGCCCGAAGAGCGCCTGCG
CCGCATGTGCATGCTGATCCTCGACGACATCCGCTCGAAGAAGACCACCCGCTTCTTCCCCGAGCTGTGGGCGCTGTCCA
ATCACGATCCATTCGTGCTCGAACGCATTCAGGATCTCTATGTCCGCGCCCGCGCGCCGCTTCTGGAGATCATCACCGAG
ATGCGGCCCGACCTGCCACCGATGGACCGCGAGACGGTGTCACTGTTCATATCGGGCTCGATGGAGGGAATGACCATCTT
CGCGGGCCACGAAAAGCCGTTCGAACCGCGCATGCCGCAGATCGAGCGAGTGGCGGTCCATGCCTTCTGCAACCTGGTGA
AGACGATCACTTCCGAACAGATCAGGGGGTTGGCAACCGCCTGA

Upstream 100 bases:

>100_bases
GTCTCAAAAGGGCAACAAATCTGTCAAGTGACCTAAATTTGTCAGGTGACAGGTTTTTCCGCTGGCGCTAATGTCGGAGC
GTATGCAAGGAAAAACCGAT

Downstream 100 bases:

>100_bases
CGGGATAGCCCTGCATCTTCTTGATGCGCCGTAGCGAGAAACTGGAGCGCATGGCGGACACGCCCGGCAACCGCGCCAGG
CAATCGCGGTGAATGCGGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Regulatory Protein TetR

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MYQKEDAPKFVTDMIMPEREGGYLKGHETRELILRTALTILIEEGYRAMSMRRVAAACDLKFGNLTYHYRSREDLVRAMM
DAVIRSYEIEFEDIMHMPGVPPEERLRRMCMLILDDIRSKKTTRFFPELWALSNHDPFVLERIQDLYVRARAPLLEIITE
MRPDLPPMDRETVSLFISGSMEGMTIFAGHEKPFEPRMPQIERVAVHAFCNLVKTITSEQIRGLATA

Sequences:

>Translated_227_residues
MYQKEDAPKFVTDMIMPEREGGYLKGHETRELILRTALTILIEEGYRAMSMRRVAAACDLKFGNLTYHYRSREDLVRAMM
DAVIRSYEIEFEDIMHMPGVPPEERLRRMCMLILDDIRSKKTTRFFPELWALSNHDPFVLERIQDLYVRARAPLLEIITE
MRPDLPPMDRETVSLFISGSMEGMTIFAGHEKPFEPRMPQIERVAVHAFCNLVKTITSEQIRGLATA
>Mature_227_residues
MYQKEDAPKFVTDMIMPEREGGYLKGHETRELILRTALTILIEEGYRAMSMRRVAAACDLKFGNLTYHYRSREDLVRAMM
DAVIRSYEIEFEDIMHMPGVPPEERLRRMCMLILDDIRSKKTTRFFPELWALSNHDPFVLERIQDLYVRARAPLLEIITE
MRPDLPPMDRETVSLFISGSMEGMTIFAGHEKPFEPRMPQIERVAVHAFCNLVKTITSEQIRGLATA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26429; Mature: 26429

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQKEDAPKFVTDMIMPEREGGYLKGHETRELILRTALTILIEEGYRAMSMRRVAAACDL
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KFGNLTYHYRSREDLVRAMMDAVIRSYEIEFEDIMHMPGVPPEERLRRMCMLILDDIRSK
EECCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KTTRFFPELWALSNHDPFVLERIQDLYVRARAPLLEIITEMRPDLPPMDRETVSLFISGS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEEECC
MEGMTIFAGHEKPFEPRMPQIERVAVHAFCNLVKTITSEQIRGLATA
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQKEDAPKFVTDMIMPEREGGYLKGHETRELILRTALTILIEEGYRAMSMRRVAAACDL
CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KFGNLTYHYRSREDLVRAMMDAVIRSYEIEFEDIMHMPGVPPEERLRRMCMLILDDIRSK
EECCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
KTTRFFPELWALSNHDPFVLERIQDLYVRARAPLLEIITEMRPDLPPMDRETVSLFISGS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHEEEEEECC
MEGMTIFAGHEKPFEPRMPQIERVAVHAFCNLVKTITSEQIRGLATA
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA