Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is ald [H]
Identifier: 87199699
GI number: 87199699
Start: 1766893
End: 1768008
Strand: Reverse
Name: ald [H]
Synonym: Saro_1682
Alternate gene names: 87199699
Gene position: 1768008-1766893 (Counterclockwise)
Preceding gene: 87199701
Following gene: 87199695
Centisome position: 49.64
GC content: 67.29
Gene sequence:
>1116_bases ATGCGCGTCGGAACCGTCCGTGAAATCAAGAACCATGAATACCGCGTCGGGCTTACCCCCGAAAGCGTCCGCGAACTCGT CGCCCATGGCCACGAAGTGTGGGTCGAAGCCGGCGCGGGCAACGGCATAGGAGCAAGCGACGCCGACTACGAAGGCGCGG GCGCGATCATCAAGGCCGATGCCAGGACCGTGTTCGACGGTTGCGAGATGATCGTGAAGGTCAAGGAACCCCAGGCCGTC GAGCGCGCGATGCTGCGCCGTGGCCAGGTGCTCTACACTTATCTCCATCTCGCACCCGATCCGGAACAGACCGCCGACCT CGTCAAGTCCGGCGTCACCGCGATCGCCTATGAAACCGTCACCGGCGCGGGCAATGCCCTGCCCCTGCTCAAGCCCATGA GCCAGGTCGCAGGTCGCATGTCGATCCAGGCTGGCGCGACAGCGCTCGAAAAGGCCAACGGGGGCCGGGGCGTGCTGCTT GGCGGCGTACCGGGCGTGCTGCCGGGCAAGGTCGTCGTCATCGGCGGCGGCGTGGTGGGGTTCAATGCGGCGCAGATGGC CGTGGGGCTTGGCGCCGACGTGACCATCCTCGACCGCGACCCTGACGTGCTCGAACGCCTCGACAACCACTTCGAAGGCC GCGCCCGCACGCTCTATTCGGGCAAGGCCGCGCTTGCAGCGCTGGTCGCCGAGGCCGACCTCGTGATCGGCGCCGTGCTG ATCCCCGGCGCCGCCGCGCCGAAGCTGGTCACGCGCGACATGCTGGCGACGATGAAGCCCGGCGCGGTTCTCGTCGACGT TGCCATCGACCAGGGCGGCTGCTTCGAGACCAGCAAGGCGACGACCCATGCCGACCCCACCTATGTCGTCGACGGCGTGG TCCACTACTGCGTCGCCAACATGCCGGGCGCGGTTGCACGTACCAGCACCTACGCGCTGAACAACGTCACGCTCCCCCAC GCGCTGCGCATCGCGGACAAGGGCTGGAAGGAAGCGCTGCGCGCCGACCCCAACCTCGCAGCGGGCCTGAACGTCCACGA GGGCAAGGTCACTTACGAAGCCGTGGCAACCGAACTGGGATACGAATACACCCCGGTCGCCGACATTCTCGCCTGA
Upstream 100 bases:
>100_bases CCAAACAGCCACATCGCAAGGCTGCAAATAGGCAAGAACTGCCGGGACCATCGCGATAGTCTTGCGTTTACCAGGAGACC ACGAGCCACAGGAGCTTGTC
Downstream 100 bases:
>100_bases CCGGGACCGGGGCGGCCTCCTTTAGAAGGTCGCCCCTCCCCGACTACCGCCCGTGCCTAGATCGCGTTGATGTCGACGAC GGTCGGGATCGTGTCGTTTA
Product: L-alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRVGTVREIKNHEYRVGLTPESVRELVAHGHEVWVEAGAGNGIGASDADYEGAGAIIKADARTVFDGCEMIVKVKEPQAV ERAMLRRGQVLYTYLHLAPDPEQTADLVKSGVTAIAYETVTGAGNALPLLKPMSQVAGRMSIQAGATALEKANGGRGVLL GGVPGVLPGKVVVIGGGVVGFNAAQMAVGLGADVTILDRDPDVLERLDNHFEGRARTLYSGKAALAALVAEADLVIGAVL IPGAAAPKLVTRDMLATMKPGAVLVDVAIDQGGCFETSKATTHADPTYVVDGVVHYCVANMPGAVARTSTYALNNVTLPH ALRIADKGWKEALRADPNLAAGLNVHEGKVTYEAVATELGYEYTPVADILA
Sequences:
>Translated_371_residues MRVGTVREIKNHEYRVGLTPESVRELVAHGHEVWVEAGAGNGIGASDADYEGAGAIIKADARTVFDGCEMIVKVKEPQAV ERAMLRRGQVLYTYLHLAPDPEQTADLVKSGVTAIAYETVTGAGNALPLLKPMSQVAGRMSIQAGATALEKANGGRGVLL GGVPGVLPGKVVVIGGGVVGFNAAQMAVGLGADVTILDRDPDVLERLDNHFEGRARTLYSGKAALAALVAEADLVIGAVL IPGAAAPKLVTRDMLATMKPGAVLVDVAIDQGGCFETSKATTHADPTYVVDGVVHYCVANMPGAVARTSTYALNNVTLPH ALRIADKGWKEALRADPNLAAGLNVHEGKVTYEAVATELGYEYTPVADILA >Mature_371_residues MRVGTVREIKNHEYRVGLTPESVRELVAHGHEVWVEAGAGNGIGASDADYEGAGAIIKADARTVFDGCEMIVKVKEPQAV ERAMLRRGQVLYTYLHLAPDPEQTADLVKSGVTAIAYETVTGAGNALPLLKPMSQVAGRMSIQAGATALEKANGGRGVLL GGVPGVLPGKVVVIGGGVVGFNAAQMAVGLGADVTILDRDPDVLERLDNHFEGRARTLYSGKAALAALVAEADLVIGAVL IPGAAAPKLVTRDMLATMKPGAVLVDVAIDQGGCFETSKATTHADPTYVVDGVVHYCVANMPGAVARTSTYALNNVTLPH ALRIADKGWKEALRADPNLAAGLNVHEGKVTYEAVATELGYEYTPVADILA
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=346, Percent_Identity=30.0578034682081, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI122939153, Length=346, Percent_Identity=30.0578034682081, Blast_Score=125, Evalue=6e-29, Organism=Escherichia coli, GI1787887, Length=346, Percent_Identity=33.2369942196532, Blast_Score=130, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17550456, Length=337, Percent_Identity=29.673590504451, Blast_Score=114, Evalue=8e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 38633; Mature: 38633
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGTVREIKNHEYRVGLTPESVRELVAHGHEVWVEAGAGNGIGASDADYEGAGAIIKAD CCCCCHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEECC ARTVFDGCEMIVKVKEPQAVERAMLRRGQVLYTYLHLAPDPEQTADLVKSGVTAIAYETV CHHHHHHCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEE TGAGNALPLLKPMSQVAGRMSIQAGATALEKANGGRGVLLGGVPGVLPGKVVVIGGGVVG CCCCCCCHHHHHHHHHHHCEEHHHCCHHHHHCCCCCEEEECCCCCCCCCEEEEEECCEEC FNAAQMAVGLGADVTILDRDPDVLERLDNHFEGRARTLYSGKAALAALVAEADLVIGAVL CCHHHHHEECCCCEEEECCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEHEE IPGAAAPKLVTRDMLATMKPGAVLVDVAIDQGGCFETSKATTHADPTYVVDGVVHYCVAN CCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC MPGAVARTSTYALNNVTLPHALRIADKGWKEALRADPNLAAGLNVHEGKVTYEAVATELG CCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECCEECCCCCHHHHHHHHHC YEYTPVADILA CCCCCHHHHCC >Mature Secondary Structure MRVGTVREIKNHEYRVGLTPESVRELVAHGHEVWVEAGAGNGIGASDADYEGAGAIIKAD CCCCCHHHHCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEECC ARTVFDGCEMIVKVKEPQAVERAMLRRGQVLYTYLHLAPDPEQTADLVKSGVTAIAYETV CHHHHHHCEEEEEECCCHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHCCCCEEEEEEE TGAGNALPLLKPMSQVAGRMSIQAGATALEKANGGRGVLLGGVPGVLPGKVVVIGGGVVG CCCCCCCHHHHHHHHHHHCEEHHHCCHHHHHCCCCCEEEECCCCCCCCCEEEEEECCEEC FNAAQMAVGLGADVTILDRDPDVLERLDNHFEGRARTLYSGKAALAALVAEADLVIGAVL CCHHHHHEECCCCEEEECCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHEEHEE IPGAAAPKLVTRDMLATMKPGAVLVDVAIDQGGCFETSKATTHADPTYVVDGVVHYCVAN CCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC MPGAVARTSTYALNNVTLPHALRIADKGWKEALRADPNLAAGLNVHEGKVTYEAVATELG CCCCHHHCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEECCEECCCCCHHHHHHHHHC YEYTPVADILA CCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]