Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is mprA [H]
Identifier: 87199648
GI number: 87199648
Start: 1706922
End: 1707605
Strand: Reverse
Name: mprA [H]
Synonym: Saro_1631
Alternate gene names: 87199648
Gene position: 1707605-1706922 (Counterclockwise)
Preceding gene: 87199649
Following gene: 87199635
Centisome position: 47.95
GC content: 61.55
Gene sequence:
>684_bases ATGAGAATACTCATCATCGAGGACGAGATCGAACTGGCGGGTGCCTTGCACCGTGGCCTTACCCAGGAAGGCTGCAAGGT CACCCTCGCGACCGACGGCTCCACAGGGCTAGAGCTTGCAGCCTCCCTCGCATTCGACTTCATCCTGCTCGACGTGAACC TGCCGGACATGGATGGTTTCGAAGTCTGCGCGCGCCTGCGCGAACAGGGTTCCACCATGCCGATCATCATGGTTACGGCG CGTGACGAGATTGCAGATCGCATTCGCGGGCTCAAGGGTGGCGCGGATGATTACCTGACCAAGCCTTTCGCGTTCGAGGA ACTGCTGGCGCGCATGGACGCGATCAAGCGTCGCATGGCACCCTCGCAAGGTGGCAAGGTACAGCCCGATGGACGGATCA CCGTCGGCGACCTACACTTCGATCCGCGCACGATGACCCTGACGAGGGCAGGCACGCCGGTGCAGCTCACGGTCAAGGAA ATGGGTGTACTGCGTCTCTTGATGGAATCGCCGGGCACGGTGATCTCGCGCACCGAAATCCTTCGCGCAGTCTGGGGAAT GGAGGACGATCCCCTGACCAACATTGTCGAAGTCTACCTGAGCCGACTGCGCCGCAAGCTCCACGCCCTCGGCCCGCCAG TGGTCGAAAACGTGCGTGGCTTCGGGTACCGCCTGATCGCTTAA
Upstream 100 bases:
>100_bases TCGGTGGCACGATCAGCCTAGAGAGCCGGCTCCATGAAGGAACCCGGGTATCGATACGTCTCCCCCTCCCGCCAAGCGGG ACGGCACATGGAATCATCGC
Downstream 100 bases:
>100_bases AAAGGGGCGCCGGCAAGGCGCCCCTCTCGTTCAACTTACGAGGCCAGTCGCCCGGTTCCGCTATCCGGCGTGCGTTGCCG CAGCCATTGCAGCGCCAGGA
Product: two component transcriptional regulator
Products: NA
Alternate protein names: Mycobacterial persistence regulator A [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MRILIIEDEIELAGALHRGLTQEGCKVTLATDGSTGLELAASLAFDFILLDVNLPDMDGFEVCARLREQGSTMPIIMVTA RDEIADRIRGLKGGADDYLTKPFAFEELLARMDAIKRRMAPSQGGKVQPDGRITVGDLHFDPRTMTLTRAGTPVQLTVKE MGVLRLLMESPGTVISRTEILRAVWGMEDDPLTNIVEVYLSRLRRKLHALGPPVVENVRGFGYRLIA
Sequences:
>Translated_227_residues MRILIIEDEIELAGALHRGLTQEGCKVTLATDGSTGLELAASLAFDFILLDVNLPDMDGFEVCARLREQGSTMPIIMVTA RDEIADRIRGLKGGADDYLTKPFAFEELLARMDAIKRRMAPSQGGKVQPDGRITVGDLHFDPRTMTLTRAGTPVQLTVKE MGVLRLLMESPGTVISRTEILRAVWGMEDDPLTNIVEVYLSRLRRKLHALGPPVVENVRGFGYRLIA >Mature_227_residues MRILIIEDEIELAGALHRGLTQEGCKVTLATDGSTGLELAASLAFDFILLDVNLPDMDGFEVCARLREQGSTMPIIMVTA RDEIADRIRGLKGGADDYLTKPFAFEELLARMDAIKRRMAPSQGGKVQPDGRITVGDLHFDPRTMTLTRAGTPVQLTVKE MGVLRLLMESPGTVISRTEILRAVWGMEDDPLTNIVEVYLSRLRRKLHALGPPVVENVRGFGYRLIA
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. Functions as a tr
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=40.7079646017699, Blast_Score=163, Evalue=9e-42, Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=39.1111111111111, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=37.280701754386, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=36.4035087719298, Blast_Score=138, Evalue=4e-34, Organism=Escherichia coli, GI1790552, Length=227, Percent_Identity=35.2422907488987, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=34.6666666666667, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=35.2422907488987, Blast_Score=125, Evalue=2e-30, Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=34.5132743362832, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=35.8078602620087, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=30.8035714285714, Blast_Score=107, Evalue=4e-25, Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=35.2173913043478, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=34.6491228070175, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=29.6943231441048, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=34.5794392523364, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1790299, Length=133, Percent_Identity=29.3233082706767, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790437, Length=111, Percent_Identity=32.4324324324324, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788713, Length=123, Percent_Identity=34.9593495934959, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1787487, Length=101, Percent_Identity=31.6831683168317, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI145693157, Length=106, Percent_Identity=33.9622641509434, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789149, Length=129, Percent_Identity=31.0077519379845, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25060; Mature: 25060
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIIEDEIELAGALHRGLTQEGCKVTLATDGSTGLELAASLAFDFILLDVNLPDMDGF CEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCCHH EVCARLREQGSTMPIIMVTARDEIADRIRGLKGGADDYLTKPFAFEELLARMDAIKRRMA HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC PSQGGKVQPDGRITVGDLHFDPRTMTLTRAGTPVQLTVKEMGVLRLLMESPGTVISRTEI CCCCCEECCCCCEEEEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH LRAVWGMEDDPLTNIVEVYLSRLRRKLHALGPPVVENVRGFGYRLIA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECC >Mature Secondary Structure MRILIIEDEIELAGALHRGLTQEGCKVTLATDGSTGLELAASLAFDFILLDVNLPDMDGF CEEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHEEEEEEEECCCCCCHH EVCARLREQGSTMPIIMVTARDEIADRIRGLKGGADDYLTKPFAFEELLARMDAIKRRMA HHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC PSQGGKVQPDGRITVGDLHFDPRTMTLTRAGTPVQLTVKEMGVLRLLMESPGTVISRTEI CCCCCEECCCCCEEEEEEEECCCEEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH LRAVWGMEDDPLTNIVEVYLSRLRRKLHALGPPVVENVRGFGYRLIA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA