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The map label for this gene is exoB [H]

Identifier: 87199635

GI number: 87199635

Start: 1687215

End: 1688267

Strand: Reverse

Name: exoB [H]

Synonym: Saro_1618

Alternate gene names: 87199635

Gene position: 1688267-1687215 (Counterclockwise)

Preceding gene: 87199648

Following gene: 87199634

Centisome position: 47.4

GC content: 64.86

Gene sequence:

>1053_bases
ATGATCTTCGATGGATCGTCCGAACGCCGCGGCTCGATACTGGTTACGGGCGGTGCAGGCTACATCGGCAGTCACGCGGT
ACTCGCCTTGCTGGATGCTGGGTGGCCGGTCATCGTGCTCGATAACCTGACCACCGGCTTTCGCTGGGCGGTCGACCCGC
GGGCAAGCTTCGTCGAAGGCGACGTCACGGACAGCGCCCTTGTGCGCTCTATCCTGACCTATCACGAAGTCGCCGCGATC
ATGCATTTCGCAGGGTCGGTGGTGGTACCGGAATCCGTCGTCGATCCGCTCAAGTATTACGGCAACAACACGGCCGCGAC
CTGTTCGTTGCTTCGAAACGCGGTGGATTGCGGAGTACCGCACATCGTATTCTCCTCGACTGCCGCAACCTACGGCAGTC
CAGACGTGGCGCAGGTCTGCGAGAATACGCCCACCCGGCCGATCAATCCCTATGGCCGCTCGAAGCTGGTGGTGGAGGCG
ATGCTCGCCGATGCCGCTGCCGCATATCCGATCAACTACTGTGCGCTGCGCTACTTCAATGTGGCGGGCGCCGATCCGGC
CGGACGAACCGGACAATCGACGGCCGGCGCGACGCATCTCATCAAGGTCTGCGTCGAGGCGGCGCTTGGGCGGCGCGAGC
TGGTCGAGGTCTATGGCACGGATTATGACACCCACGACGGCACCGGCGTGCGCGACTACATCCATGTCAGCGACCTGGCC
GACGCGCACGTTCACGCGCTGCACCTGCTGATGGACGATCCCGAGGCCAGCCACACCATGAACTGCGGCTATGGCACCGG
CTTTTCGGTGCTGGACGTCCTCGACGCGGTCGAGCGCATCTCCGGCCGCGAGATCCGACGGGTCATGCGCCCTCGGCGTC
CTGGCGACCCGGCTGCGCTGATCGCCGACAATAACCTGATCCTGTCTCGCACGCGCTGGCGCCCCCGCCACGCCCGGCTC
GGGGATATCGTGCGCCATGCTCTCGCCTGGGAAGACCAGCTTGCTCGGCGTAAGCCTGGTCAACCTGTCGGCCAGCGCGA
AATCGCCGCCTGA

Upstream 100 bases:

>100_bases
ATTTGGAGTTACCACGTGATGCGATGAATACTCCAGCTCGACGGAGATAGAATAAGGCGCGAGGGCAGGAACGCCCGTCT
CGCTTCTGATGAGGGACAGC

Downstream 100 bases:

>100_bases
AGCGTTCCGGCATCCGTACAATTTCGCATGGCGGGCCGTACCTGCTGTCCTCATCGTGCATGCGTGGGCGCGGCGCAGTT
CTGCCCGCACCGCGCCTGCG

Product: UDP-galactose 4-epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MIFDGSSERRGSILVTGGAGYIGSHAVLALLDAGWPVIVLDNLTTGFRWAVDPRASFVEGDVTDSALVRSILTYHEVAAI
MHFAGSVVVPESVVDPLKYYGNNTAATCSLLRNAVDCGVPHIVFSSTAATYGSPDVAQVCENTPTRPINPYGRSKLVVEA
MLADAAAAYPINYCALRYFNVAGADPAGRTGQSTAGATHLIKVCVEAALGRRELVEVYGTDYDTHDGTGVRDYIHVSDLA
DAHVHALHLLMDDPEASHTMNCGYGTGFSVLDVLDAVERISGREIRRVMRPRRPGDPAALIADNNLILSRTRWRPRHARL
GDIVRHALAWEDQLARRKPGQPVGQREIAA

Sequences:

>Translated_350_residues
MIFDGSSERRGSILVTGGAGYIGSHAVLALLDAGWPVIVLDNLTTGFRWAVDPRASFVEGDVTDSALVRSILTYHEVAAI
MHFAGSVVVPESVVDPLKYYGNNTAATCSLLRNAVDCGVPHIVFSSTAATYGSPDVAQVCENTPTRPINPYGRSKLVVEA
MLADAAAAYPINYCALRYFNVAGADPAGRTGQSTAGATHLIKVCVEAALGRRELVEVYGTDYDTHDGTGVRDYIHVSDLA
DAHVHALHLLMDDPEASHTMNCGYGTGFSVLDVLDAVERISGREIRRVMRPRRPGDPAALIADNNLILSRTRWRPRHARL
GDIVRHALAWEDQLARRKPGQPVGQREIAA
>Mature_350_residues
MIFDGSSERRGSILVTGGAGYIGSHAVLALLDAGWPVIVLDNLTTGFRWAVDPRASFVEGDVTDSALVRSILTYHEVAAI
MHFAGSVVVPESVVDPLKYYGNNTAATCSLLRNAVDCGVPHIVFSSTAATYGSPDVAQVCENTPTRPINPYGRSKLVVEA
MLADAAAAYPINYCALRYFNVAGADPAGRTGQSTAGATHLIKVCVEAALGRRELVEVYGTDYDTHDGTGVRDYIHVSDLA
DAHVHALHLLMDDPEASHTMNCGYGTGFSVLDVLDAVERISGREIRRVMRPRRPGDPAALIADNNLILSRTRWRPRHARL
GDIVRHALAWEDQLARRKPGQPVGQREIAA

Specific function: Galactose metabolism; third step. [C]

COG id: COG1087

COG function: function code M; UDP-glucose 4-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI56237023, Length=318, Percent_Identity=40.8805031446541, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI56118217, Length=318, Percent_Identity=40.8805031446541, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI189083684, Length=318, Percent_Identity=40.8805031446541, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI42516563, Length=288, Percent_Identity=28.125, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI7657641, Length=248, Percent_Identity=24.5967741935484, Blast_Score=79, Evalue=5e-15,
Organism=Escherichia coli, GI1786974, Length=341, Percent_Identity=40.7624633431085, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1790049, Length=272, Percent_Identity=27.2058823529412, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI48994969, Length=312, Percent_Identity=27.8846153846154, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982035, Length=320, Percent_Identity=36.25, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71982038, Length=323, Percent_Identity=36.2229102167183, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17539532, Length=253, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6319493, Length=335, Percent_Identity=34.3283582089552, Blast_Score=185, Evalue=1e-47,
Organism=Drosophila melanogaster, GI19923002, Length=339, Percent_Identity=38.0530973451327, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI21356223, Length=247, Percent_Identity=27.9352226720648, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR005886
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 37752; Mature: 37752

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDGSSERRGSILVTGGAGYIGSHAVLALLDAGWPVIVLDNLTTGFRWAVDPRASFVEG
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCHHCCC
DVTDSALVRSILTYHEVAAIMHFAGSVVVPESVVDPLKYYGNNTAATCSLLRNAVDCGVP
CCCHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
HIVFSSTAATYGSPDVAQVCENTPTRPINPYGRSKLVVEAMLADAAAAYPINYCALRYFN
CEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEE
VAGADPAGRTGQSTAGATHLIKVCVEAALGRRELVEVYGTDYDTHDGTGVRDYIHVSDLA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHEEEHHHHH
DAHVHALHLLMDDPEASHTMNCGYGTGFSVLDVLDAVERISGREIRRVMRPRRPGDPAAL
HHHHHHHHEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEE
IADNNLILSRTRWRPRHARLGDIVRHALAWEDQLARRKPGQPVGQREIAA
EECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFDGSSERRGSILVTGGAGYIGSHAVLALLDAGWPVIVLDNLTTGFRWAVDPRASFVEG
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCHHCCC
DVTDSALVRSILTYHEVAAIMHFAGSVVVPESVVDPLKYYGNNTAATCSLLRNAVDCGVP
CCCHHHHHHHHHHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
HIVFSSTAATYGSPDVAQVCENTPTRPINPYGRSKLVVEAMLADAAAAYPINYCALRYFN
CEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEE
VAGADPAGRTGQSTAGATHLIKVCVEAALGRRELVEVYGTDYDTHDGTGVRDYIHVSDLA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCHHEEEHHHHH
DAHVHALHLLMDDPEASHTMNCGYGTGFSVLDVLDAVERISGREIRRVMRPRRPGDPAAL
HHHHHHHHEEECCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEE
IADNNLILSRTRWRPRHARLGDIVRHALAWEDQLARRKPGQPVGQREIAA
EECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026752 [H]