Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199593
Identifier: 87199593
GI number: 87199593
Start: 1631614
End: 1632303
Strand: Reverse
Name: 87199593
Synonym: Saro_1576
Alternate gene names: NA
Gene position: 1632303-1631614 (Counterclockwise)
Preceding gene: 87199596
Following gene: 87199592
Centisome position: 45.83
GC content: 63.62
Gene sequence:
>690_bases ATGATCCCACCGTTCATCGATCTCAGCGTCCACCACAAGCCCGGAGGCTTGTCGGACCGGATCGCATTCGGCTTCACCAA GGCCTTGCGCTGGTGCGCCGACACGTTCTTTGCCGAGCGCTACGGCCACCGCGCGGTCGTGCTGGAGACGGTCGCGGCGG TGCCCGGCATGGTCGGCGCGACCATCAACCACCTCGCTTGCCTGCGTCGCATGTGCGACGACAAGGGGTGGATCAAGACC CTGATGGACGAGGCTGAAAACGAACGCATGCACCTGATGACGTTCATCGAAATCTCGAAGCCGACGCTGTTCGAACGGGC CGTGATCATGGGGGTACAGTGGGTATTCTACCTGTTCTTCTTTGGCCTCTACCTCGTCAGCCCCAAGACCGCGCACCGCG TGGTCGGCTACTTCGAGGAAGAAGCGGTGATCAGCTACACGCACTACCTTGCCGAAATCGATCAGGGTCGCAGCGCCAAC GTCCCCGCGCCCGCTATCGCCAAGCGCTATTGGGGGCTGCCCGACAACGCGATGCTGCGTGACGTGGTGCTGGTCGTCCG GGCTGACGAAGCGCACCACCGCGACGTCAACCACGGCTTTGCCAACGAACTCGCAGGGCTTCCGGTGGCGGAACCCGCCG CCTGCCCGCCACACCACGCGCTTGAGCCCAACTGGAAGAAGGCTGCCTGA
Upstream 100 bases:
>100_bases AGTAGGGAGATGATCCAAATTTCGCCCTTCCTGCCAGAAACTTAGATCAGTTCCATCAGCGACGCACCAAGGAAATCGCG CCGCTCATGGAGAAGTTCCA
Downstream 100 bases:
>100_bases TCGCGGCAATCTTCCGAGGCAAGGAGGATAGGACAAATGGCTCCCTACGACACGATAGCGCTGTTCGTAAGCGATCCTGC TGTGCTGGCCTCCTTGCAAT
Product: alternative oxidase
Products: NA
Alternate protein names: AlteRNAtive Oxidase Superfamily; Oxidase
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MIPPFIDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGATINHLACLRRMCDDKGWIKT LMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFFFGLYLVSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSAN VPAPAIAKRYWGLPDNAMLRDVVLVVRADEAHHRDVNHGFANELAGLPVAEPAACPPHHALEPNWKKAA
Sequences:
>Translated_229_residues MIPPFIDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGATINHLACLRRMCDDKGWIKT LMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFFFGLYLVSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSAN VPAPAIAKRYWGLPDNAMLRDVVLVVRADEAHHRDVNHGFANELAGLPVAEPAACPPHHALEPNWKKAA >Mature_229_residues MIPPFIDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGATINHLACLRRMCDDKGWIKT LMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFFFGLYLVSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSAN VPAPAIAKRYWGLPDNAMLRDVVLVVRADEAHHRDVNHGFANELAGLPVAEPAACPPHHALEPNWKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25740; Mature: 25740
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPFIDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGA CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH TINHLACLRRMCDDKGWIKTLMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFF HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH FGLYLVSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSANVPAPAIAKRYWGLPDNAMLR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHH DVVLVVRADEAHHRDVNHGFANELAGLPVAEPAACPPHHALEPNWKKAA HHHHEEECCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPPFIDLSVHHKPGGLSDRIAFGFTKALRWCADTFFAERYGHRAVVLETVAAVPGMVGA CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH TINHLACLRRMCDDKGWIKTLMDEAENERMHLMTFIEISKPTLFERAVIMGVQWVFYLFF HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH FGLYLVSPKTAHRVVGYFEEEAVISYTHYLAEIDQGRSANVPAPAIAKRYWGLPDNAMLR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHHHH DVVLVVRADEAHHRDVNHGFANELAGLPVAEPAACPPHHALEPNWKKAA HHHHEEECCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA