Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
---|---|
Accession | NC_007794 |
Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199592
Identifier: 87199592
GI number: 87199592
Start: 1631230
End: 1631577
Strand: Reverse
Name: 87199592
Synonym: Saro_1575
Alternate gene names: NA
Gene position: 1631577-1631230 (Counterclockwise)
Preceding gene: 87199593
Following gene: 87199591
Centisome position: 45.81
GC content: 64.08
Gene sequence:
>348_bases ATGGCTCCCTACGACACGATAGCGCTGTTCGTAAGCGATCCTGCTGTGCTGGCCTCCTTGCAATTCGCCCTGACGGTCGA GGGCTTCGAACCGATCGTGGAAGCAACAGAGCCGGGAGCGCGGGCGGTCGTCATCGACCGAGGCAACCTTGCCGAAGGCC TGAAACTGCTGGACGAAATGCGCGGATCGGGCAATCAGGCCGCAGCGTTCATCCTCGCCACCTGCCCTCCGCCGAGACTG ACGGCAACAGCCGCCGCGATGGGGGCAACACTTATCGAAAAGCCGCTGCGCGGCGACGAACTGGCCCGCGCGCTGCGGAC CGGACTGCAAACCGAAAAGGTTGCGTGA
Upstream 100 bases:
>100_bases GGCGGAACCCGCCGCCTGCCCGCCACACCACGCGCTTGAGCCCAACTGGAAGAAGGCTGCCTGATCGCGGCAATCTTCCG AGGCAAGGAGGATAGGACAA
Downstream 100 bases:
>100_bases CATGAACGATCTTTCGATCACCGAAGGCGACATCGACCGTCTGGTGCCGGAATTCTACGCCAGGGTCCGCAAGGACGAAG TTCTCGGACCGATCTTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MAPYDTIALFVSDPAVLASLQFALTVEGFEPIVEATEPGARAVVIDRGNLAEGLKLLDEMRGSGNQAAAFILATCPPPRL TATAAAMGATLIEKPLRGDELARALRTGLQTEKVA
Sequences:
>Translated_115_residues MAPYDTIALFVSDPAVLASLQFALTVEGFEPIVEATEPGARAVVIDRGNLAEGLKLLDEMRGSGNQAAAFILATCPPPRL TATAAAMGATLIEKPLRGDELARALRTGLQTEKVA >Mature_114_residues APYDTIALFVSDPAVLASLQFALTVEGFEPIVEATEPGARAVVIDRGNLAEGLKLLDEMRGSGNQAAAFILATCPPPRLT ATAAAMGATLIEKPLRGDELARALRTGLQTEKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12006; Mature: 11875
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPYDTIALFVSDPAVLASLQFALTVEGFEPIVEATEPGARAVVIDRGNLAEGLKLLDEM CCCCCEEEEEECCHHHHHHHHHEEEECCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH RGSGNQAAAFILATCPPPRLTATAAAMGATLIEKPLRGDELARALRTGLQTEKVA CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure APYDTIALFVSDPAVLASLQFALTVEGFEPIVEATEPGARAVVIDRGNLAEGLKLLDEM CCCCEEEEEECCHHHHHHHHHEEEECCCHHHHHCCCCCCEEEEEECCCHHHHHHHHHHH RGSGNQAAAFILATCPPPRLTATAAAMGATLIEKPLRGDELARALRTGLQTEKVA CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA