Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is cat2 [H]
Identifier: 87199596
GI number: 87199596
Start: 1634560
End: 1635861
Strand: Reverse
Name: cat2 [H]
Synonym: Saro_1579
Alternate gene names: 87199596
Gene position: 1635861-1634560 (Counterclockwise)
Preceding gene: 87199598
Following gene: 87199593
Centisome position: 45.93
GC content: 65.98
Gene sequence:
>1302_bases ATGGACGCAAGGGAACTCTACCGTGCCAGGCTGACCACTGCTGCCGATGCAGTGGACGGGATCGGCAGCGGCATGAACGT GGCGATGGGCATGGCCGTGGCCGAACCGCCCGCCCTGCTGCGGGCTCTGGCGGAAAGGGTGGAGAGCGCCGGCCTCACGG ACCTGCGGCTGTGGTATCTCCATTCGCTCGACGCGGCCGGGCAAACGGTGCTGAAGCCCGGACTGCTGGACCGGGTGCGC CCGCACTGCCTGTTCCTCAGCGACATAGAGCGCAAACTGATCCGCAACGCGCCAACGGGCAGTCATGGCCCGGTGGAGTT CGTGCCGGTCGCGTTCAGCGGCGCGATCGACGCGATGACGCGGCAAGGGCCGCTCGATGCCTGCATTACGACCGTTTCGC CTATGGACCGCAACGGCTGGTTCACGTTCGGCACCAGCAACGACTACACCTCGTCGGTCGCGCGCAGCGCGCAGCGGCTG ATCGTCGAGGTCAACCCGAACATGCCGCGCGTATTCGGGGAGTCGCTGCTGCACGTGTCCGAAGTCGATGCCATTATCGA AAGCGACACGCCCCTGCCTGAAATCCAGTGCGGCACGCCAAGCCCGGAAGAACAGGCCATCGCCCGCATCGTCGCCGACA TGATCGACGACGGGGCATGCTTGCAGATGGGCATCGGGACGCTGCCAACCGCGGTCTGCGCCCTGCTCGAGGATCGCAGG GACCTTGGCATCCACACGGAACTGATGACCCCGGCCCTTGCCCGCCTGATGGAATGCGGAGCGGTGACCAACCGGGCGAA GGCGACCTATCGCGGACGAAGCGTGTTCACATTCGCCATGGGCGACGCCCCGTTCTATGCCTATCTCGACGATAATCCGG CCTTCCACTCGCTGCCGGTGAACCTGGCCAACGACCCGCGGCACATCGCCAAGAACGACAACGTCGTCTCGGTAAACGGA ACGTTGCAAGTGGACCTTGGCGGGGCGTGCAATTCCGAACATCTGCTCGGCCGCCAGTACAGCGGATCGGGCGGGCAGCT CGATTTCGTGCGCGGGGCCACCGCGTCGCGCGGCGGGAAGTCGATCATCGCCTGCCAATCCACCGCGCTTTCGGGCAAGG TGTCGCGCATAGTTCCCACGCTCGACGGGCCGGTGACCACCCCGCGCAACGACACGCACATCGTCGTCACCGAATATGGC TGGGTGGACCTTCGCGGAAAGACCGTGGCGCAACGGGCGGACGCGCTGATCGGCCTGGCACACCCCCGCTTCCGCGACGA ACTGGCAAACAGCCTGCGCTGA
Upstream 100 bases:
>100_bases TTGATTGCAGTCTAGAATTGCATGGTGACATCAGGCCACTACGACATTGCGCAGGGTGACGGATGCGGTCGAAGCGTCCG GGACCGCGAAAGGACCGGGA
Downstream 100 bases:
>100_bases CCCCGCGGCGCCATCAGGTCAGCGTGGCGAGCGTCACCATGCGCACCAGATCGGAAAGCGTCCGCGCCTGCATCTTCATC ATGGCATTGGCGCGGTAGAC
Product: acetyl-CoA hydrolase/transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MDARELYRARLTTAADAVDGIGSGMNVAMGMAVAEPPALLRALAERVESAGLTDLRLWYLHSLDAAGQTVLKPGLLDRVR PHCLFLSDIERKLIRNAPTGSHGPVEFVPVAFSGAIDAMTRQGPLDACITTVSPMDRNGWFTFGTSNDYTSSVARSAQRL IVEVNPNMPRVFGESLLHVSEVDAIIESDTPLPEIQCGTPSPEEQAIARIVADMIDDGACLQMGIGTLPTAVCALLEDRR DLGIHTELMTPALARLMECGAVTNRAKATYRGRSVFTFAMGDAPFYAYLDDNPAFHSLPVNLANDPRHIAKNDNVVSVNG TLQVDLGGACNSEHLLGRQYSGSGGQLDFVRGATASRGGKSIIACQSTALSGKVSRIVPTLDGPVTTPRNDTHIVVTEYG WVDLRGKTVAQRADALIGLAHPRFRDELANSLR
Sequences:
>Translated_433_residues MDARELYRARLTTAADAVDGIGSGMNVAMGMAVAEPPALLRALAERVESAGLTDLRLWYLHSLDAAGQTVLKPGLLDRVR PHCLFLSDIERKLIRNAPTGSHGPVEFVPVAFSGAIDAMTRQGPLDACITTVSPMDRNGWFTFGTSNDYTSSVARSAQRL IVEVNPNMPRVFGESLLHVSEVDAIIESDTPLPEIQCGTPSPEEQAIARIVADMIDDGACLQMGIGTLPTAVCALLEDRR DLGIHTELMTPALARLMECGAVTNRAKATYRGRSVFTFAMGDAPFYAYLDDNPAFHSLPVNLANDPRHIAKNDNVVSVNG TLQVDLGGACNSEHLLGRQYSGSGGQLDFVRGATASRGGKSIIACQSTALSGKVSRIVPTLDGPVTTPRNDTHIVVTEYG WVDLRGKTVAQRADALIGLAHPRFRDELANSLR >Mature_433_residues MDARELYRARLTTAADAVDGIGSGMNVAMGMAVAEPPALLRALAERVESAGLTDLRLWYLHSLDAAGQTVLKPGLLDRVR PHCLFLSDIERKLIRNAPTGSHGPVEFVPVAFSGAIDAMTRQGPLDACITTVSPMDRNGWFTFGTSNDYTSSVARSAQRL IVEVNPNMPRVFGESLLHVSEVDAIIESDTPLPEIQCGTPSPEEQAIARIVADMIDDGACLQMGIGTLPTAVCALLEDRR DLGIHTELMTPALARLMECGAVTNRAKATYRGRSVFTFAMGDAPFYAYLDDNPAFHSLPVNLANDPRHIAKNDNVVSVNG TLQVDLGGACNSEHLLGRQYSGSGGQLDFVRGATASRGGKSIIACQSTALSGKVSRIVPTLDGPVTTPRNDTHIVVTEYG WVDLRGKTVAQRADALIGLAHPRFRDELANSLR
Specific function: Unknown
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=456, Percent_Identity=25, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI32563853, Length=428, Percent_Identity=37.1495327102804, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17538151, Length=440, Percent_Identity=32.5, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI21358615, Length=420, Percent_Identity=35.2380952380952, Blast_Score=234, Evalue=1e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro [H]
EC number: NA
Molecular weight: Translated: 46430; Mature: 46430
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDARELYRARLTTAADAVDGIGSGMNVAMGMAVAEPPALLRALAERVESAGLTDLRLWYL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHH HSLDAAGQTVLKPGLLDRVRPHCLFLSDIERKLIRNAPTGSHGPVEFVPVAFSGAIDAMT HHHCCCCHHHHCCCHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHH RQGPLDACITTVSPMDRNGWFTFGTSNDYTSSVARSAQRLIVEVNPNMPRVFGESLLHVS CCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHH EVDAIIESDTPLPEIQCGTPSPEEQAIARIVADMIDDGACLQMGIGTLPTAVCALLEDRR HHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH DLGIHTELMTPALARLMECGAVTNRAKATYRGRSVFTFAMGDAPFYAYLDDNPAFHSLPV CCCCHHHHHHHHHHHHHHHCCHHCCCHHEECCCEEEEEEECCCCEEEEECCCCCEEEECC NLANDPRHIAKNDNVVSVNGTLQVDLGGACNSEHLLGRQYSGSGGQLDFVRGATASRGGK CCCCCCHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC SIIACQSTALSGKVSRIVPTLDGPVTTPRNDTHIVVTEYGWVDLRGKTVAQRADALIGLA EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCC HPRFRDELANSLR CCHHHHHHHHHCC >Mature Secondary Structure MDARELYRARLTTAADAVDGIGSGMNVAMGMAVAEPPALLRALAERVESAGLTDLRLWYL CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHH HSLDAAGQTVLKPGLLDRVRPHCLFLSDIERKLIRNAPTGSHGPVEFVPVAFSGAIDAMT HHHCCCCHHHHCCCHHHHCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHH RQGPLDACITTVSPMDRNGWFTFGTSNDYTSSVARSAQRLIVEVNPNMPRVFGESLLHVS CCCCHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHH EVDAIIESDTPLPEIQCGTPSPEEQAIARIVADMIDDGACLQMGIGTLPTAVCALLEDRR HHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHH DLGIHTELMTPALARLMECGAVTNRAKATYRGRSVFTFAMGDAPFYAYLDDNPAFHSLPV CCCCHHHHHHHHHHHHHHHCCHHCCCHHEECCCEEEEEEECCCCEEEEECCCCCEEEECC NLANDPRHIAKNDNVVSVNGTLQVDLGGACNSEHLLGRQYSGSGGQLDFVRGATASRGGK CCCCCCHHHCCCCCEEEECCEEEEEECCCCCCCCCCCCEECCCCCEEEEEECCCCCCCCC SIIACQSTALSGKVSRIVPTLDGPVTTPRNDTHIVVTEYGWVDLRGKTVAQRADALIGLA EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCEEEEEECCEEEECCCHHHHHHHHHHCCC HPRFRDELANSLR CCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]