Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199135
Identifier: 87199135
GI number: 87199135
Start: 1160890
End: 1161315
Strand: Direct
Name: 87199135
Synonym: Saro_1113
Alternate gene names: NA
Gene position: 1160890-1161315 (Clockwise)
Preceding gene: 87199134
Following gene: 87199136
Centisome position: 32.59
GC content: 65.96
Gene sequence:
>426_bases ATGCGCGATAGCTTGCCTGACTGCGCCGACGCCGCTAATCGCCCGGCTTTCCTGTTCCGGGGACAACCTGAATTGACCGT CGAAGCCACGCCTCTTCCCGTTGCCGTACCGACCGTCCAGCTTTCGCTGGTGCGGCCTGCCGACCGTTCCGACAAACCTC ACCTGCCGGTGCGCGGTGACCTTGCGCACATCGGCCTCGCCGGGCGCTACTTCGTGCCGCACTACGCCGTGCCTATGGCG CACGTGGTGAAGGCCGGAACTGCGCTGCGTGGTGCAGGCAAGCCGGAAGGCGGAGAACTGCGGCTACTGGCCCAGGGCGA AGTGTTTGACGTTCTCGACATTGCGGGCGGTTGGGCCTGGGGCCAGGCGCAGTCTGACCTGCTGGTCGGTTACGTCGACA TGGCCGTGCTGGAAGCGGCGGAATGA
Upstream 100 bases:
>100_bases TCGCCTGGCGCCCCGCGGCGAAGCCCGGGCGCCCCAAGGGGGGAGACGCCCTTGGACTGCGCGCGGCGTGGGGGCTGCTC AAGGCGCGATACGGCTGAGA
Downstream 100 bases:
>100_bases CGACTTCTGTATTCATCGACGGTGCGGCAGGCACCACGGGCCTCGAGATCGCGGAGCGGCTGTCCGGACGCAGCGAGTTC GCGCTGATCGCTCTCGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRDSLPDCADAANRPAFLFRGQPELTVEATPLPVAVPTVQLSLVRPADRSDKPHLPVRGDLAHIGLAGRYFVPHYAVPMA HVVKAGTALRGAGKPEGGELRLLAQGEVFDVLDIAGGWAWGQAQSDLLVGYVDMAVLEAAE
Sequences:
>Translated_141_residues MRDSLPDCADAANRPAFLFRGQPELTVEATPLPVAVPTVQLSLVRPADRSDKPHLPVRGDLAHIGLAGRYFVPHYAVPMA HVVKAGTALRGAGKPEGGELRLLAQGEVFDVLDIAGGWAWGQAQSDLLVGYVDMAVLEAAE >Mature_141_residues MRDSLPDCADAANRPAFLFRGQPELTVEATPLPVAVPTVQLSLVRPADRSDKPHLPVRGDLAHIGLAGRYFVPHYAVPMA HVVKAGTALRGAGKPEGGELRLLAQGEVFDVLDIAGGWAWGQAQSDLLVGYVDMAVLEAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14960; Mature: 14960
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSLPDCADAANRPAFLFRGQPELTVEATPLPVAVPTVQLSLVRPADRSDKPHLPVRGD CCCCCCCCHHHCCCCEEEEECCCCEEEECCCCCEEECEEEEEEECCCCCCCCCCCCCCCC LAHIGLAGRYFVPHYAVPMAHVVKAGTALRGAGKPEGGELRLLAQGEVFDVLDIAGGWAW EEEECCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCC GQAQSDLLVGYVDMAVLEAAE CCCCCCEEEEHHHHEEHCCCC >Mature Secondary Structure MRDSLPDCADAANRPAFLFRGQPELTVEATPLPVAVPTVQLSLVRPADRSDKPHLPVRGD CCCCCCCCHHHCCCCEEEEECCCCEEEECCCCCEEECEEEEEEECCCCCCCCCCCCCCCC LAHIGLAGRYFVPHYAVPMAHVVKAGTALRGAGKPEGGELRLLAQGEVFDVLDIAGGWAW EEEECCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCC GQAQSDLLVGYVDMAVLEAAE CCCCCCEEEEHHHHEEHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA