Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is argC [H]
Identifier: 87199136
GI number: 87199136
Start: 1161312
End: 1162241
Strand: Direct
Name: argC [H]
Synonym: Saro_1114
Alternate gene names: 87199136
Gene position: 1161312-1162241 (Clockwise)
Preceding gene: 87199135
Following gene: 87199138
Centisome position: 32.61
GC content: 68.28
Gene sequence:
>930_bases ATGACGACTTCTGTATTCATCGACGGTGCGGCAGGCACCACGGGCCTCGAGATCGCGGAGCGGCTGTCCGGACGCAGCGA GTTCGCGCTGATCGCTCTCGAAGACGCGCGCCGCAAGGACGATGCCGCGCGGGCCGAGGCGATCAACGACGCCGACGTCG TGATCCTGTGCCTGCCTGACGATGCCGCGCGCGATGCCGTGGCGATGATCCGCAACGACCGCACCCGTGTAATCGACGCT TCGACCGCGCATCGCGTCGCCGATGGCTGGACATACGGCTTTCCCGAAATCGTCGGCCGCGAGACCGTGGCGCAGGCCAA GCGCGTTTCGAATCCCGGCTGCTATCCGACGGGTTTCCTCGGCCTGCTTGCCCCGCTGGTGCACAATGGCCTGCTGCCGG CGGCATGGCCCTATAGCTGCACCGGCGTGTCCGGCTACTCAGGCGGCGGCAAGGCGCTGATCGCACGGTTCGAGCAGGAC CGCGACATCGCCTGGCGTGGCTATGGCCTGACCTTCGGGCACAAGCACGTGCCCGAGATGCAGCGCTATGCCGGCCTTGC CATTGCGCCGATGTTCTCGCCGGCGGTGGTCCCGGCGCACCGCGGCATGGTGGTCGAGATCCCGCTGCCGCTGGGCGTGA TGCCGGGCAACGTTCCTGCCGAACTGTTGCGCGCCGCGCTCACCCAGTTCTACGCCGGATCGCCGATCGTGACGGTGGCT CAGGAATTGCCGGCGGACGGCGAAATGCTGATGCGCGCCTCGATGGAGCCGTGGGACGGCCTCGAACTGCACGTCATGGG CAGCAGCGACGGCGAACAGGCGCGGCTCGTCGCGGTTCTCGACAACCTCGGCAAGGGCGCGAGCGGGGCGGCGGTACAGA CGCTGAACCTGATGGCGGGACTGGACGAAACGGCGGGCCTGCGGCTCTAG
Upstream 100 bases:
>100_bases TGTTTGACGTTCTCGACATTGCGGGCGGTTGGGCCTGGGGCCAGGCGCAGTCTGACCTGCTGGTCGGTTACGTCGACATG GCCGTGCTGGAAGCGGCGGA
Downstream 100 bases:
>100_bases TTCCGGCAAACGCTGGCTGCAAAAAAAGGCCCGCGCTCCGGTTGGAGGCGGGCCTTTTTTGGTATTCCGCTGCTGCCGGA AGATCAGTCTTCCGGAGCGA
Product: N-acetyl-gamma-glutamyl-phosphate reductase
Products: NA
Alternate protein names: AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTTSVFIDGAAGTTGLEIAERLSGRSEFALIALEDARRKDDAARAEAINDADVVILCLPDDAARDAVAMIRNDRTRVIDA STAHRVADGWTYGFPEIVGRETVAQAKRVSNPGCYPTGFLGLLAPLVHNGLLPAAWPYSCTGVSGYSGGGKALIARFEQD RDIAWRGYGLTFGHKHVPEMQRYAGLAIAPMFSPAVVPAHRGMVVEIPLPLGVMPGNVPAELLRAALTQFYAGSPIVTVA QELPADGEMLMRASMEPWDGLELHVMGSSDGEQARLVAVLDNLGKGASGAAVQTLNLMAGLDETAGLRL
Sequences:
>Translated_309_residues MTTSVFIDGAAGTTGLEIAERLSGRSEFALIALEDARRKDDAARAEAINDADVVILCLPDDAARDAVAMIRNDRTRVIDA STAHRVADGWTYGFPEIVGRETVAQAKRVSNPGCYPTGFLGLLAPLVHNGLLPAAWPYSCTGVSGYSGGGKALIARFEQD RDIAWRGYGLTFGHKHVPEMQRYAGLAIAPMFSPAVVPAHRGMVVEIPLPLGVMPGNVPAELLRAALTQFYAGSPIVTVA QELPADGEMLMRASMEPWDGLELHVMGSSDGEQARLVAVLDNLGKGASGAAVQTLNLMAGLDETAGLRL >Mature_308_residues TTSVFIDGAAGTTGLEIAERLSGRSEFALIALEDARRKDDAARAEAINDADVVILCLPDDAARDAVAMIRNDRTRVIDAS TAHRVADGWTYGFPEIVGRETVAQAKRVSNPGCYPTGFLGLLAPLVHNGLLPAAWPYSCTGVSGYSGGGKALIARFEQDR DIAWRGYGLTFGHKHVPEMQRYAGLAIAPMFSPAVVPAHRGMVVEIPLPLGVMPGNVPAELLRAALTQFYAGSPIVTVAQ ELPADGEMLMRASMEPWDGLELHVMGSSDGEQARLVAVLDNLGKGASGAAVQTLNLMAGLDETAGLRL
Specific function: Arginine biosynthesis; third step. [C]
COG id: COG0002
COG function: function code E; Acetylglutamate semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAGSA dehydrogenase family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790396, Length=349, Percent_Identity=26.647564469914, Blast_Score=74, Evalue=8e-15, Organism=Saccharomyces cerevisiae, GI6320913, Length=278, Percent_Identity=29.4964028776978, Blast_Score=87, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010136 - InterPro: IPR016040 - InterPro: IPR000534 [H]
Pfam domain/function: PF01118 Semialdhyde_dh [H]
EC number: =1.2.1.38 [H]
Molecular weight: Translated: 32693; Mature: 32562
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSVFIDGAAGTTGLEIAERLSGRSEFALIALEDARRKDDAARAEAINDADVVILCLPD CCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCC DAARDAVAMIRNDRTRVIDASTAHRVADGWTYGFPEIVGRETVAQAKRVSNPGCYPTGFL HHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GLLAPLVHNGLLPAAWPYSCTGVSGYSGGGKALIARFEQDRDIAWRGYGLTFGHKHVPEM HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCHHH QRYAGLAIAPMFSPAVVPAHRGMVVEIPLPLGVMPGNVPAELLRAALTQFYAGSPIVTVA HHHCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHH QELPADGEMLMRASMEPWDGLELHVMGSSDGEQARLVAVLDNLGKGASGAAVQTLNLMAG HHCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEHHHCCCCCCCCHHHHHHHHHC LDETAGLRL CCHHCCCCC >Mature Secondary Structure TTSVFIDGAAGTTGLEIAERLSGRSEFALIALEDARRKDDAARAEAINDADVVILCLPD CCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCC DAARDAVAMIRNDRTRVIDASTAHRVADGWTYGFPEIVGRETVAQAKRVSNPGCYPTGFL HHHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH GLLAPLVHNGLLPAAWPYSCTGVSGYSGGGKALIARFEQDRDIAWRGYGLTFGHKHVPEM HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCHHH QRYAGLAIAPMFSPAVVPAHRGMVVEIPLPLGVMPGNVPAELLRAALTQFYAGSPIVTVA HHHCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHH QELPADGEMLMRASMEPWDGLELHVMGSSDGEQARLVAVLDNLGKGASGAAVQTLNLMAG HHCCCCCHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEHHHCCCCCCCCHHHHHHHHHC LDETAGLRL CCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA