Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199112
Identifier: 87199112
GI number: 87199112
Start: 1133585
End: 1134334
Strand: Direct
Name: 87199112
Synonym: Saro_1090
Alternate gene names: NA
Gene position: 1133585-1134334 (Clockwise)
Preceding gene: 87199111
Following gene: 87199113
Centisome position: 31.83
GC content: 68.13
Gene sequence:
>750_bases ATGAACGGCGAAGGCGGTCAGAATTCCTGGGATGAGCAGGCGGCGGGCAAGCCGTTTGACGTATCGGCGGAACTCGGTTC GCCAGAGCCGGGCGACGAACGCCTGGCCCTTGGCGACGAGGAACGCCTGCCCTGGCTGGAAAGCGCCGACGACGTCGACC TCGACGATGAGGAAGGCGGGAACAGCCGCCTGATCGGCTTTGCGGTCGTGGGCCTGATCGTGCTCGCTGCCTTGATCGGC GGCGTCTACTGGGCGACCAACCGCGGGCAGGGGCCGGCGGGCGCGGACGGCAGCCTGATCGAGGCGAGCAAGGAGCCCTA CAAGGTCGCGCCGAGCGATCCGGGCGGGAAGACCTTCGCCGGCACCGGCGATTCCAGCTTCAAGGTGAGCGAGGGCGAAA AGCCGGGCGCGAATCTGGCAGGTTCCGCCTCGCCCGCGCCCGCGCCTGCGGCAACCCCGTCTGCATCGGCCAGCGCGAAG CCGAGCGCCGCCGCATCCGACAAGCCGTTGCCGAGCGGCGTGGGTGTGCAGATCGGGGCGTTCTCGTCGAATGCCGCCGC CGAAGCTGCCTGGCAGAAGCTCAGCGTCAATCACGAAGCGCTCAAGGGCCTGTCTCACCGCGTGATCGAAGGCAGGGCCG ATATCGGCACGGTCTATCGTCTTCAGGCCGTGGCGGGGGACCTCTCGTCCGCCAGCGCGCTCTGCCAGAAACTTCAGGCG GGCGGTTTGAAATGCCAGGTAAAGCGCTGA
Upstream 100 bases:
>100_bases CTTGCCGCGCAAATCGGGCAGGTAATCCGCAATGGCCTCGCTGTCCTTGGCGTCGAGGCCGCGCAAGAGCTTTGATGGGC AAAACGGGGCGGGCTACGGC
Downstream 100 bases:
>100_bases ACAGGGGCTGTTCCGCTCCCGGTTGAAAGCGGGGCAGGCCAGGTTCACGATCATCCGCGGCCTGCGCGCGGCGGCGCGAC TGCTTTTCCCCGGTCTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNGEGGQNSWDEQAAGKPFDVSAELGSPEPGDERLALGDEERLPWLESADDVDLDDEEGGNSRLIGFAVVGLIVLAALIG GVYWATNRGQGPAGADGSLIEASKEPYKVAPSDPGGKTFAGTGDSSFKVSEGEKPGANLAGSASPAPAPAATPSASASAK PSAAASDKPLPSGVGVQIGAFSSNAAAEAAWQKLSVNHEALKGLSHRVIEGRADIGTVYRLQAVAGDLSSASALCQKLQA GGLKCQVKR
Sequences:
>Translated_249_residues MNGEGGQNSWDEQAAGKPFDVSAELGSPEPGDERLALGDEERLPWLESADDVDLDDEEGGNSRLIGFAVVGLIVLAALIG GVYWATNRGQGPAGADGSLIEASKEPYKVAPSDPGGKTFAGTGDSSFKVSEGEKPGANLAGSASPAPAPAATPSASASAK PSAAASDKPLPSGVGVQIGAFSSNAAAEAAWQKLSVNHEALKGLSHRVIEGRADIGTVYRLQAVAGDLSSASALCQKLQA GGLKCQVKR >Mature_249_residues MNGEGGQNSWDEQAAGKPFDVSAELGSPEPGDERLALGDEERLPWLESADDVDLDDEEGGNSRLIGFAVVGLIVLAALIG GVYWATNRGQGPAGADGSLIEASKEPYKVAPSDPGGKTFAGTGDSSFKVSEGEKPGANLAGSASPAPAPAATPSASASAK PSAAASDKPLPSGVGVQIGAFSSNAAAEAAWQKLSVNHEALKGLSHRVIEGRADIGTVYRLQAVAGDLSSASALCQKLQA GGLKCQVKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25094; Mature: 25094
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGEGGQNSWDEQAAGKPFDVSAELGSPEPGDERLALGDEERLPWLESADDVDLDDEEGG CCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC NSRLIGFAVVGLIVLAALIGGVYWATNRGQGPAGADGSLIEASKEPYKVAPSDPGGKTFA CCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCEEE GTGDSSFKVSEGEKPGANLAGSASPAPAPAATPSASASAKPSAAASDKPLPSGVGVQIGA CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC FSSNAAAEAAWQKLSVNHEALKGLSHRVIEGRADIGTVYRLQAVAGDLSSASALCQKLQA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH GGLKCQVKR CCCEEEECC >Mature Secondary Structure MNGEGGQNSWDEQAAGKPFDVSAELGSPEPGDERLALGDEERLPWLESADDVDLDDEEGG CCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC NSRLIGFAVVGLIVLAALIGGVYWATNRGQGPAGADGSLIEASKEPYKVAPSDPGGKTFA CCEEHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCCEEECCCCCCCCEEE GTGDSSFKVSEGEKPGANLAGSASPAPAPAATPSASASAKPSAAASDKPLPSGVGVQIGA CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEC FSSNAAAEAAWQKLSVNHEALKGLSHRVIEGRADIGTVYRLQAVAGDLSSASALCQKLQA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH GGLKCQVKR CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA