Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is nagZ [H]

Identifier: 87199113

GI number: 87199113

Start: 1134430

End: 1135497

Strand: Direct

Name: nagZ [H]

Synonym: Saro_1091

Alternate gene names: 87199113

Gene position: 1134430-1135497 (Clockwise)

Preceding gene: 87199112

Following gene: 87199114

Centisome position: 31.85

GC content: 67.7

Gene sequence:

>1068_bases
TTGGGCGCTCCGGGCCTTGCAAATGGCCATGGCATCCGCGAATCCACCACCATGCTTCCGGCGATCTTCGGGCTTTCGGG
CCTGACCCTGACTGAAGACGAACGCGCCTTCTTCCGCGATGCGGACCCGGCGGGATATATCCTGTTCGGTCGGAATGTGG
AAAGCCCGGCGCAGCTTCGCGCCCTGACGGACGAGCTGCGCGCGCTGCATGGCCGTGACCGCACTTTCATCTGCATCGAT
CAGGAAGGCGGGCGCGTCGCGCGGATGAAGCCGCCGGTCTGGCAACCCTATCCTCCCGGCGAGCGGTTCGACCGGCTCTA
CGACATCGCCCCTGCCAGCGCGATCGAGGCTGCGCGCGCCAATGCCGAAGCGCTGGGCCTCGATCTGGCGGAAGCGGGGA
TCAGCGTCGATTGCCTGCCGCTGCTCGACGTCCGCCAGCCGGGCGCGCACGACGTCATCGGGGACCGTGCGCTCGGTTCG
GAACCGATGCGCGTTGCGGCGCTCGGAAGGGCAACGCTCGATGGGCTGGCGCGCGCGGGAATTGCGGGCGTGGTCAAGCA
CATGCCGGGCCATGGCCGCGCGCTGGTCGATAGCCACAAGGAACTGCCCACGGTCTCTGCCAGCGCCGAGGAGCTGGAAA
TGGACCTCGCTCCGTTCCGCGCCCTGCGCGATGCCACCATCGGCATGACCGCGCACCTGCGGTTCCTCGCATGGGATGAC
TGGAACCCGGCGACGCACTCGCCCTTCGTCATCGAGGAGATCATCCGCAAGGCGATCGGCTTCGACGGGCTGCTCCTGAC
CGACGATCTCGATATGCAGGCGCTTGGCGGCACCGTGCCCGAACGCGCGGCGCGCGCGCAGGCTGCGGGCTGCGACATCG
CCTTGAATTGCTGGGCGAAGATGGATGACATGGTCGGCATCGCGAACAGCCTCGCGCCCATGTCTGACAAAGTGATGCAG
CGGCTGGAACGCGCGCTCGCGCCCACCGCGGCCTTCGACGCTCCAGCCGACATGACCGCTCAGGCCGCGCTTTTCGACAA
GCGCGACCGGTTGCTGGAACTGGCCTGA

Upstream 100 bases:

>100_bases
GCTGAACAGGGGCTGTTCCGCTCCCGGTTGAAAGCGGGGCAGGCCAGGTTCACGATCATCCGCGGCCTGCGCGCGGCGGC
GCGACTGCTTTTCCCCGGTC

Downstream 100 bases:

>100_bases
TGGACGAAGTCGCCGCACCGACGCTGTTCGAAGGCGACGAGGTGTGGGACGGCGTCGCCTCTGCCCAGGGCAACGACGCG
GCGCTCTATCTCGAGCTGGA

Product: beta-N-acetylhexosaminidase

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MGAPGLANGHGIRESTTMLPAIFGLSGLTLTEDERAFFRDADPAGYILFGRNVESPAQLRALTDELRALHGRDRTFICID
QEGGRVARMKPPVWQPYPPGERFDRLYDIAPASAIEAARANAEALGLDLAEAGISVDCLPLLDVRQPGAHDVIGDRALGS
EPMRVAALGRATLDGLARAGIAGVVKHMPGHGRALVDSHKELPTVSASAEELEMDLAPFRALRDATIGMTAHLRFLAWDD
WNPATHSPFVIEEIIRKAIGFDGLLLTDDLDMQALGGTVPERAARAQAAGCDIALNCWAKMDDMVGIANSLAPMSDKVMQ
RLERALAPTAAFDAPADMTAQAALFDKRDRLLELA

Sequences:

>Translated_355_residues
MGAPGLANGHGIRESTTMLPAIFGLSGLTLTEDERAFFRDADPAGYILFGRNVESPAQLRALTDELRALHGRDRTFICID
QEGGRVARMKPPVWQPYPPGERFDRLYDIAPASAIEAARANAEALGLDLAEAGISVDCLPLLDVRQPGAHDVIGDRALGS
EPMRVAALGRATLDGLARAGIAGVVKHMPGHGRALVDSHKELPTVSASAEELEMDLAPFRALRDATIGMTAHLRFLAWDD
WNPATHSPFVIEEIIRKAIGFDGLLLTDDLDMQALGGTVPERAARAQAAGCDIALNCWAKMDDMVGIANSLAPMSDKVMQ
RLERALAPTAAFDAPADMTAQAALFDKRDRLLELA
>Mature_354_residues
GAPGLANGHGIRESTTMLPAIFGLSGLTLTEDERAFFRDADPAGYILFGRNVESPAQLRALTDELRALHGRDRTFICIDQ
EGGRVARMKPPVWQPYPPGERFDRLYDIAPASAIEAARANAEALGLDLAEAGISVDCLPLLDVRQPGAHDVIGDRALGSE
PMRVAALGRATLDGLARAGIAGVVKHMPGHGRALVDSHKELPTVSASAEELEMDLAPFRALRDATIGMTAHLRFLAWDDW
NPATHSPFVIEEIIRKAIGFDGLLLTDDLDMQALGGTVPERAARAQAAGCDIALNCWAKMDDMVGIANSLAPMSDKVMQR
LERALAPTAAFDAPADMTAQAALFDKRDRLLELA

Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=318, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022956
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 38103; Mature: 37972

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAPGLANGHGIRESTTMLPAIFGLSGLTLTEDERAFFRDADPAGYILFGRNVESPAQLR
CCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCEEEEECCCCCCHHHHH
ALTDELRALHGRDRTFICIDQEGGRVARMKPPVWQPYPPGERFDRLYDIAPASAIEAARA
HHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHC
NAEALGLDLAEAGISVDCLPLLDVRQPGAHDVIGDRALGSEPMRVAALGRATLDGLARAG
CHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
IAGVVKHMPGHGRALVDSHKELPTVSASAEELEMDLAPFRALRDATIGMTAHLRFLAWDD
HHHHHHHCCCCCCHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
WNPATHSPFVIEEIIRKAIGFDGLLLTDDLDMQALGGTVPERAARAQAAGCDIALNCWAK
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHHHHHHCCCCEEEHHHHH
MDDMVGIANSLAPMSDKVMQRLERALAPTAAFDAPADMTAQAALFDKRDRLLELA
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAPGLANGHGIRESTTMLPAIFGLSGLTLTEDERAFFRDADPAGYILFGRNVESPAQLR
CCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHCCCCCCEEEEECCCCCCHHHHH
ALTDELRALHGRDRTFICIDQEGGRVARMKPPVWQPYPPGERFDRLYDIAPASAIEAARA
HHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHC
NAEALGLDLAEAGISVDCLPLLDVRQPGAHDVIGDRALGSEPMRVAALGRATLDGLARAG
CHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHH
IAGVVKHMPGHGRALVDSHKELPTVSASAEELEMDLAPFRALRDATIGMTAHLRFLAWDD
HHHHHHHCCCCCCHHHHCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC
WNPATHSPFVIEEIIRKAIGFDGLLLTDDLDMQALGGTVPERAARAQAAGCDIALNCWAK
CCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHHHHHHCCCCEEEHHHHH
MDDMVGIANSLAPMSDKVMQRLERALAPTAAFDAPADMTAQAALFDKRDRLLELA
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA