Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199068
Identifier: 87199068
GI number: 87199068
Start: 1085515
End: 1086528
Strand: Direct
Name: 87199068
Synonym: Saro_1046
Alternate gene names: NA
Gene position: 1085515-1086528 (Clockwise)
Preceding gene: 87199067
Following gene: 87199069
Centisome position: 30.48
GC content: 68.34
Gene sequence:
>1014_bases GTGGCTAAGGAAACCGTTCTGGTCGTCTGCCCCGGGCGCGGGACCTACAACGCGCCCGAGCTTGGCTATCTGGCGCGGCA TCATGCAGGGTCGGAGTGGCTCGCGCGGTTCGATGCCATGCGCGAGCAGGCGGGCAAGGAGACGCTGTCTGCGCTGGATG GTGCGGTGAAGTTCACCCCGGCCCACCTGCGCGGCGACAATGCGGCGCCGCTGATCCATGCCTGCGCTTACCTCGATTTC CTTGGCCTGGATCGCGAGCGGTTCGAGATCGTGGCCGTGACCGGCAATTCAATGGGCTGGTACACCGCGCTTGCCTGCGC CGGGGCCGTTGCGGGCGAACATGGCTTTGCCATTGCCGATGGCATGGGCGTGAATTCGCAGAAGCACGAACCGGGCGGAC AGGCAGTGCTGGTGCTGGTAGACGAGGACTGGAAGGTCGATCCGGCCCTGCGGCGCGCGGTCGAGGCGGCGATGGCGCGG CATGGGGTTATGCCCTCCATCCGGCTGGGCGGGATGCTGGTCGTGGCGGGGGGCGAGGCCGCGCTCGACGCGCTGGAGAA GGACCTGCCCGCGCTGGCGCGGCCGCCGATGCGGCTGGCGGGGCACGGACCGTTCCACACGCCGCTGATGCAGGCGAGCA GCGATGCCGCCCGTGCGCAGTTTCCGGAGGAATGGTTCGGGCAGCCGCAGGTGCCGCTGATCGACGGACGCGGCAAGGTG TGGCGGCGTTTCGAAAGCGCGCGCCATGACCTGTGGGACTATACCTTCGGCCACCAGATCCTTGCGCCTTACGATTTCAC TGCCGCGATGACCGTCGGCATCCGGGAGTTCGCGCCCGATCGCGTCGTGCTGCTCGGGCCGGGCGAAACGCTGGGCGGCG CCATCGGCCAGATGCTGGTCGCGCTGGACTGGCTGGACATTTCGTCGCGCGCGGTGTTTGCTGCGCGGCAGGGAGAGGAT CCGTTCCTGATCGGCATGGGCAGACCCAGCCAGCGAGGTATCGTGATCCCGTGA
Upstream 100 bases:
>100_bases CGGATGGCGGCGACCGACAGCTTCATCCCGCTCGCGCGCGCGGCAACGCATACGCTGCCGAGCCGGGACGGGATCGTGGT CAAGGTGCTGGAGATGGTGC
Downstream 100 bases:
>100_bases GCCAGCCTTCAGTACTGTTCGTGTGTCTTGGCAATATCTGCCGCTCCCCGCTGGCCGAGGCGGCCCTGCGCGCGCGCGCC TGGGAGGCGGGGGTTGCCGT
Product: acyl-carrier domain-containing protein
Products: NA
Alternate protein names: Acyl-Carrier Domain Protein; Malonyl CoA-Acyl Carrier Protein Transacylase; Acyl-Carrier Domain-Containing Protein; (Acyl-Carrier-Protein) S-Malonyltransferase-Like Protein; Acyl-Carrier Protein; Malonyl-CoA-[Acyl-Carrier-Protein] Transacylase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAKETVLVVCPGRGTYNAPELGYLARHHAGSEWLARFDAMREQAGKETLSALDGAVKFTPAHLRGDNAAPLIHACAYLDF LGLDRERFEIVAVTGNSMGWYTALACAGAVAGEHGFAIADGMGVNSQKHEPGGQAVLVLVDEDWKVDPALRRAVEAAMAR HGVMPSIRLGGMLVVAGGEAALDALEKDLPALARPPMRLAGHGPFHTPLMQASSDAARAQFPEEWFGQPQVPLIDGRGKV WRRFESARHDLWDYTFGHQILAPYDFTAAMTVGIREFAPDRVVLLGPGETLGGAIGQMLVALDWLDISSRAVFAARQGED PFLIGMGRPSQRGIVIP
Sequences:
>Translated_337_residues MAKETVLVVCPGRGTYNAPELGYLARHHAGSEWLARFDAMREQAGKETLSALDGAVKFTPAHLRGDNAAPLIHACAYLDF LGLDRERFEIVAVTGNSMGWYTALACAGAVAGEHGFAIADGMGVNSQKHEPGGQAVLVLVDEDWKVDPALRRAVEAAMAR HGVMPSIRLGGMLVVAGGEAALDALEKDLPALARPPMRLAGHGPFHTPLMQASSDAARAQFPEEWFGQPQVPLIDGRGKV WRRFESARHDLWDYTFGHQILAPYDFTAAMTVGIREFAPDRVVLLGPGETLGGAIGQMLVALDWLDISSRAVFAARQGED PFLIGMGRPSQRGIVIP >Mature_336_residues AKETVLVVCPGRGTYNAPELGYLARHHAGSEWLARFDAMREQAGKETLSALDGAVKFTPAHLRGDNAAPLIHACAYLDFL GLDRERFEIVAVTGNSMGWYTALACAGAVAGEHGFAIADGMGVNSQKHEPGGQAVLVLVDEDWKVDPALRRAVEAAMARH GVMPSIRLGGMLVVAGGEAALDALEKDLPALARPPMRLAGHGPFHTPLMQASSDAARAQFPEEWFGQPQVPLIDGRGKVW RRFESARHDLWDYTFGHQILAPYDFTAAMTVGIREFAPDRVVLLGPGETLGGAIGQMLVALDWLDISSRAVFAARQGEDP FLIGMGRPSQRGIVIP
Specific function: Unknown
COG id: COG0331
COG function: function code I; (acyl-carrier-protein) S-malonyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36252; Mature: 36121
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKETVLVVCPGRGTYNAPELGYLARHHAGSEWLARFDAMREQAGKETLSALDGAVKFTP CCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC AHLRGDNAAPLIHACAYLDFLGLDRERFEIVAVTGNSMGWYTALACAGAVAGEHGFAIAD HHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEC GMGVNSQKHEPGGQAVLVLVDEDWKVDPALRRAVEAAMARHGVMPSIRLGGMLVVAGGEA CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHH ALDALEKDLPALARPPMRLAGHGPFHTPLMQASSDAARAQFPEEWFGQPQVPLIDGRGKV HHHHHHHHCHHHCCCCHHHCCCCCCCCHHHHCCCCHHHHCCCHHHCCCCCCEEECCCHHH WRRFESARHDLWDYTFGHQILAPYDFTAAMTVGIREFAPDRVVLLGPGETLGGAIGQMLV HHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH ALDWLDISSRAVFAARQGEDPFLIGMGRPSQRGIVIP HHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure AKETVLVVCPGRGTYNAPELGYLARHHAGSEWLARFDAMREQAGKETLSALDGAVKFTP CCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC AHLRGDNAAPLIHACAYLDFLGLDRERFEIVAVTGNSMGWYTALACAGAVAGEHGFAIAD HHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEC GMGVNSQKHEPGGQAVLVLVDEDWKVDPALRRAVEAAMARHGVMPSIRLGGMLVVAGGEA CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHH ALDALEKDLPALARPPMRLAGHGPFHTPLMQASSDAARAQFPEEWFGQPQVPLIDGRGKV HHHHHHHHCHHHCCCCHHHCCCCCCCCHHHHCCCCHHHHCCCHHHCCCCCCEEECCCHHH WRRFESARHDLWDYTFGHQILAPYDFTAAMTVGIREFAPDRVVLLGPGETLGGAIGQMLV HHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH ALDWLDISSRAVFAARQGEDPFLIGMGRPSQRGIVIP HHHHCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA