Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is yhcX [H]
Identifier: 87199066
GI number: 87199066
Start: 1082367
End: 1083260
Strand: Direct
Name: yhcX [H]
Synonym: Saro_1044
Alternate gene names: 87199066
Gene position: 1082367-1083260 (Clockwise)
Preceding gene: 87199065
Following gene: 87199067
Centisome position: 30.39
GC content: 66.67
Gene sequence:
>894_bases GTGAGCTTTACCGTTGCCGCCGCGCAATATCCGGTCGACCGCCTGGAGGGGTGGGATGCCTATGAGGCGAAGCTGACGCG CTGGGTGGAGGAGGCCGCGACGGCTGGCGCGAAGCTGGCGGTTTTTCCTGAGTATGGCGCGATGGAACTGGCGAGCCTCG ATTCCGCGACGATGGGCGATCTTGCCCTGTCGATCGAGACGGTTTCCTCGCTGTTGCCGCGCGTCGATGCTCTCCATGCC GAACTGGCTGGGCAGACGGGGATGCACATTCTGGCGGCATCTGCCCCGCGCAAGGATGCCGATGGGCGCTTTCGCAACGC GGCGCGGCTGTTTGCGCCCAACGGCAGGTCCGGCGTGCAGGACAAGCTGGTGATGACGCGGTTCGAGCGTGAGCAGTGGC ATATCGCGGCGGGTTCGACCTTGCGGGTGTTTGACACGGCGCTGGGGCGGCTGGCGGTGACCATCTGTTATGACAGCGAA TTTCCGCTGCTGGCGCGCGCCTGCACGGAGGCCGGGGCGCAAGTCGTGCTGGTGCCGTCGTGCACGGATTCGCTCCATGG ATATTGGCGTGTGCGGATCGGGGCGCAGGCGCGCGCGCTGGAAGGGCAGTGCTATGCGGTCCATTCGCCTACTGTCGGAG AGGCGGAATGGTCCCCGGCGGTCGACGTCAATCGCGGTGCGGCAGGGGTCTATGGTCCGCCGGATCGCGGGATGCCCGAA GACGGCGTTCTGGCGATCGGGGACGAAGGCGCGGCGCAATGGGTCCTTGCCGAAGTGGATACGGCAAGAGTGGCCGAGCT TCGTGCCGATGGCGGCGTGCTGAACGCCTTGCATTGGACAGAGCAGCCGGGCGCGGCTCCGCTTCCGCCGGTGGAGATCG TGGACTTGCGATAG
Upstream 100 bases:
>100_bases GCTATGCCGTGGTGCCCGGGCTGACCACGCAGCTTTCGTGGAAGGAACACGGCGAGGAAGCGGAGCGGGTGAACGCGATG CAATACTGGCTGCGGCAATG
Downstream 100 bases:
>100_bases GCGGGCGGCTATCAGGCTGGTTCGTTACGAGGGAAACCATCCGCAATGTCGCTTGATGCCGCCGAGCAGGTCCACCGGCA GTTCCTTGATGCGCTGGACA
Product: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHA ELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSE FPLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR
Sequences:
>Translated_297_residues MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHA ELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSE FPLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR >Mature_296_residues SFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGDLALSIETVSSLLPRVDALHAE LAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQDKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEF PLLARACTEAGAQVVLVPSCTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPED GVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17557111, Length=194, Percent_Identity=28.3505154639175, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR003010 - InterPro: IPR001110 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF00795 CN_hydrolase [H]
EC number: NA
Molecular weight: Translated: 31680; Mature: 31549
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGD CCEEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHCCCCCCCH LALSIETVSSLLPRVDALHAELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQ HEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCEEEECCCCCCCCH DKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEFPLLARACTEAGAQVVLVPS HHHHHHHHCCCEEEEECCCEEHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEC CTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE CCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR CCEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECC >Mature Secondary Structure SFTVAAAQYPVDRLEGWDAYEAKLTRWVEEAATAGAKLAVFPEYGAMELASLDSATMGD CEEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHCCCCCCCH LALSIETVSSLLPRVDALHAELAGQTGMHILAASAPRKDADGRFRNAARLFAPNGRSGVQ HEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHCCEEEECCCCCCCCH DKLVMTRFEREQWHIAAGSTLRVFDTALGRLAVTICYDSEFPLLARACTEAGAQVVLVPS HHHHHHHHCCCEEEEECCCEEHHHHHHHCCEEEEEEECCCCCHHHHHHHHCCCEEEEEEC CTDSLHGYWRVRIGAQARALEGQCYAVHSPTVGEAEWSPAVDVNRGAAGVYGPPDRGMPE CCCCCCCEEEEEECCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DGVLAIGDEGAAQWVLAEVDTARVAELRADGGVLNALHWTEQPGAAPLPPVEIVDLR CCEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]