Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199065
Identifier: 87199065
GI number: 87199065
Start: 1081783
End: 1082370
Strand: Direct
Name: 87199065
Synonym: Saro_1043
Alternate gene names: NA
Gene position: 1081783-1082370 (Clockwise)
Preceding gene: 87199064
Following gene: 87199066
Centisome position: 30.37
GC content: 68.03
Gene sequence:
>588_bases GTGAGCATCACTGTCCGGCCACTGACCGGCGACGAGATCGCGGCGGCACTGGAAGACCTGGCGCGGCTGCGGATCGTCGT ATTCGCGGCCTACCCTTACCTTTACGATGGCGATGCGGCCTATGAGGCCGAGTACCTTGCCGAATATGCGGCGGCGCCAG ACGCGGTGCTGGTGGCGGCCTTCGAGGGCGGACGAATCGTGGGCGCGGCAACAGCCGCGCCGATGATGCACCAGAAGGCC GAGTTCCGCGCGCCGTTCGAGGCGCGCGGGCTGGATGTGACGCGGTTGTTCTATTTCGGCGAGAGCGTGCTGCTGCCCGA GTATCGCGGGCATGGGATCGGCCATGCCTTCTTCGACCACCGCGAGGCGCAGGCGCGAGCCTGCGGGGCGAACGCCGCGT GCTTTGCCGCCGTGATGCGGGCCGACGACCACCCGGCGCGGCCAGCGGACTACACGCCGCTCGACGCGTTCTGGACCAAG CGTGGCTATGCCGTGGTGCCCGGGCTGACCACGCAGCTTTCGTGGAAGGAACACGGCGAGGAAGCGGAGCGGGTGAACGC GATGCAATACTGGCTGCGGCAATGGTGA
Upstream 100 bases:
>100_bases TCCTGCCGGCCGGCGCGTTCATCGGCATTGAGGGCGGGAAGATCGCGCGCCTGACGATGTACTACAACCTTGCCGACTGG ACCAGGCAGGTCGTGGGCGA
Downstream 100 bases:
>100_bases GCTTTACCGTTGCCGCCGCGCAATATCCGGTCGACCGCCTGGAGGGGTGGGATGCCTATGAGGCGAAGCTGACGCGCTGG GTGGAGGAGGCCGCGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSITVRPLTGDEIAAALEDLARLRIVVFAAYPYLYDGDAAYEAEYLAEYAAAPDAVLVAAFEGGRIVGAATAAPMMHQKA EFRAPFEARGLDVTRLFYFGESVLLPEYRGHGIGHAFFDHREAQARACGANAACFAAVMRADDHPARPADYTPLDAFWTK RGYAVVPGLTTQLSWKEHGEEAERVNAMQYWLRQW
Sequences:
>Translated_195_residues MSITVRPLTGDEIAAALEDLARLRIVVFAAYPYLYDGDAAYEAEYLAEYAAAPDAVLVAAFEGGRIVGAATAAPMMHQKA EFRAPFEARGLDVTRLFYFGESVLLPEYRGHGIGHAFFDHREAQARACGANAACFAAVMRADDHPARPADYTPLDAFWTK RGYAVVPGLTTQLSWKEHGEEAERVNAMQYWLRQW >Mature_194_residues SITVRPLTGDEIAAALEDLARLRIVVFAAYPYLYDGDAAYEAEYLAEYAAAPDAVLVAAFEGGRIVGAATAAPMMHQKAE FRAPFEARGLDVTRLFYFGESVLLPEYRGHGIGHAFFDHREAQARACGANAACFAAVMRADDHPARPADYTPLDAFWTKR GYAVVPGLTTQLSWKEHGEEAERVNAMQYWLRQW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21578; Mature: 21447
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITVRPLTGDEIAAALEDLARLRIVVFAAYPYLYDGDAAYEAEYLAEYAAAPDAVLVAA CEEEEECCCCHHHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHHHHHHHCCCCEEEEEE FEGGRIVGAATAAPMMHQKAEFRAPFEARGLDVTRLFYFGESVLLPEYRGHGIGHAFFDH ECCCEEEEHHHHHHHHHHHHHHCCCHHHCCCCEEEHEEECCEEECCCCCCCCCCHHHHHH REAQARACGANAACFAAVMRADDHPARPADYTPLDAFWTKRGYAVVPGLTTQLSWKEHGE HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEECCCCCEECCHHHCCH EAERVNAMQYWLRQW HHHHHHHHHHHHHCC >Mature Secondary Structure SITVRPLTGDEIAAALEDLARLRIVVFAAYPYLYDGDAAYEAEYLAEYAAAPDAVLVAA EEEEECCCCHHHHHHHHHHHHHHHHEEEECCEEECCCCHHHHHHHHHHHCCCCEEEEEE FEGGRIVGAATAAPMMHQKAEFRAPFEARGLDVTRLFYFGESVLLPEYRGHGIGHAFFDH ECCCEEEEHHHHHHHHHHHHHHCCCHHHCCCCEEEHEEECCEEECCCCCCCCCCHHHHHH REAQARACGANAACFAAVMRADDHPARPADYTPLDAFWTKRGYAVVPGLTTQLSWKEHGE HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEECCCCCEECCHHHCCH EAERVNAMQYWLRQW HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA