Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87199024
Identifier: 87199024
GI number: 87199024
Start: 1046149
End: 1047036
Strand: Direct
Name: 87199024
Synonym: Saro_1002
Alternate gene names: NA
Gene position: 1046149-1047036 (Clockwise)
Preceding gene: 87199023
Following gene: 87199028
Centisome position: 29.37
GC content: 68.24
Gene sequence:
>888_bases ATGCCGCACACCGTTCGCACGCTGGCGGAAGGCCTGACCTTCGGTGAAGGCCCTCGCTGGCGGGCGGACGATCGCGGTGG CCGGCTCTGGTTCTCCGATTTCTTCTCGCAGTCCATCCGCTCGGTGGGGATGGACGGCGACGTCGCGGTGGAGCTTGAGC TGGACGACCGGCCATCCGGCCTTGGCTGGATGCCCGATGGCTCTCTGCTGTTCGTTGCCATGAACAGCAGAGAGGTGCGC AGGCGCGGGCCTGATGGCACTGTCGCGTTGCATGCCGACCTTTCCGGCGTCGCCAGCCACACCTGCAACGACATGGTTGT CGATGCGGATGGCGGTGCCTGGGTTGGCAACTTCGGCGTGGACTTTGCCGAACTCATGCACCGCTCCTTCGCCGACGTGG CGGCGGACCCGCCGCTTGCCGACCTCGCCCGCGTCGCACCGGACGGCACGGCTACAGTGGCGGCCAGGGGCATGGCCTTT GCCAACGGCAGCGTGATTACCCCGGACGGCAGGACGCTGATCGTCGCTGAATCCCTCGGACGGCGGCTCACGGCCTTCGA TATCGCGCCGGACGGTTCGCTGTCGAACCGACGGACCTGGGCGGACACGCCGTCGCGCTCTCCCGATGGCATCGCTCTCG ATGCCGAAGGTGCGGTCTGGTTCGCGAACGCCTTTGCCGGCGAATGCGTCCGTATTGCCGAAGGCGGAGAGGTGCTGGAC GTCGTCGAGACCGGCGCGCGCAACTGCTACGCCTGCATGCTCGGCGGGCCCGAGGGGCGGCACCTGTTCATGCTGGTGGC CGATACGGTGGAACCCGACGCCGGGGTTCTCCCCACGGGCGCGATTCTGGTGACCGAAGTCGAGGTCTCCCGCGCCGGGC GTCCCTGA
Upstream 100 bases:
>100_bases CGGGCGACTATGTCGTCGGCACGCCGCTTCCCATCGACGGCGGCATCGTCAACGCGTGGATTCCGGAAAACGCCGTCGAT CCGAGCGGACACTGACGCCG
Downstream 100 bases:
>100_bases CGCCTGCTCAGCCCCGCATCAGCCCGCGCACGAAGTCGATCAGCCCTGTCTGGCGCGTGCGGCGCATGCGCTCGGCCGCC AGGATTTCCCGGACCTTGCC
Product: gluconolactonase
Products: NA
Alternate protein names: SMP-30/Gluconolaconase/LRE Domain-Containing Protein; SMP-30/Gluconolaconase/LRE Domain Protein; 5-Valerolactone Hydrolase; SMP-30/Gluconolaconase/LRE-Like Region-Containing Protein; Gluconolactonase Protein; SMP-30/Gluconolaconase/LRE-Like Region Family; Smp-30/Gluconolaconase/Lre-Like Region-Containing Protein; Lactone Hydrolase; Senescence Marker Protein-
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVR RRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAF ANGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP
Sequences:
>Translated_295_residues MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVR RRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAF ANGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP >Mature_294_residues PHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSGLGWMPDGSLLFVAMNSREVRR RGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGVDFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFA NGSVITPDGRTLIVAESLGRRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLDV VETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP
Specific function: Unknown
COG id: COG3386
COG function: function code G; Gluconolactonase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31129; Mature: 30998
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSG CCCHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC LGWMPDGSLLFVAMNSREVRRRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGV CCCCCCCCEEEEEECCCHHHHCCCCCEEEEEECCCHHHHCCCCCEEEECCCCEEEECCCC DFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFANGSVITPDGRTLIVAESLG CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEECCCCEECCCCCEEEEEHHHC RRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD CEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCEEE VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHHCCCCC >Mature Secondary Structure PHTVRTLAEGLTFGEGPRWRADDRGGRLWFSDFFSQSIRSVGMDGDVAVELELDDRPSG CCHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC LGWMPDGSLLFVAMNSREVRRRGPDGTVALHADLSGVASHTCNDMVVDADGGAWVGNFGV CCCCCCCCEEEEEECCCHHHHCCCCCEEEEEECCCHHHHCCCCCEEEECCCCEEEECCCC DFAELMHRSFADVAADPPLADLARVAPDGTATVAARGMAFANGSVITPDGRTLIVAESLG CHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECCEEECCCCEECCCCCEEEEEHHHC RRLTAFDIAPDGSLSNRRTWADTPSRSPDGIALDAEGAVWFANAFAGECVRIAEGGEVLD CEEEEEEECCCCCCCCCEEECCCCCCCCCCEEEECCCCEEEEECCCCCEEEEECCCCEEE VVETGARNCYACMLGGPEGRHLFMLVADTVEPDAGVLPTGAILVTEVEVSRAGRP HHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA