Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198964
Identifier: 87198964
GI number: 87198964
Start: 989648
End: 990808
Strand: Direct
Name: 87198964
Synonym: Saro_0942
Alternate gene names: NA
Gene position: 989648-990808 (Clockwise)
Preceding gene: 87198963
Following gene: 87198965
Centisome position: 27.79
GC content: 68.3
Gene sequence:
>1161_bases ATGAGCAAGGCCGCCCCGCTCAGGATTCTCCACCTTCATTCCACGTTCGATGCCGGGGGCAAGGAACGCCGCGCGGTGGC GCTGATGAACCGCTGGGCACGGCAAGGCGGGGCAAGGGCGATCGAGCACCACATCGTTTCGGCACAGCCCGGCTCGATGG GGGCAAGGAGCCTGATCGACAAGCGCGTCGCCGTGTTCTTCCCTTTCGGGTTCCCGCCGCTTGCAGGCAAATTGCGCCTT TCGCGCCTGCAACAGCTTGCACGTGCGATGCGCGGCTTCGACCTTGTTCTCACCTATAACTGGGGCGCGATGGACGCAGC GATGGCGCATGCCGTCTTCGCCCCGTCGATGGGCCTTGCGCCGCTGGTCCATCACGAGGACGGCTTCAACGCCGATGAAG CGGGCGGCCTCAAGCGTGGCCGCAACTGGTATCGCATGGTCGCGCTTTCTCGCGCCAGCGCGCTGGTAGTTCCGTCGCGC GGGCTGGAAGAGATCGCGCTGGGCTCCTGGCGCCAGCCGCGTGCCCGCGTACATCGCATCCTCAACGGCATCGATACCGC GGCCTATGCCCGCAAGCCCAGGCCCGACGTGTTGCCGCGCGTGGTCAAGCGGCCGGGCGAAAAATGGCTCGGCACCCTGG CCGGCCTGCGCGCGGTCAAGAACCTGCCGCGCATGGTTCGGGCGATGAAGGCGCTGCCGCCCGAATGGCATCTCGTCATT CTTGGCGAAGGGCCGGAGCGGGAGGCCATCCTTGCCGAGGCCATGCGGCAGGAGGTCGGTCACCGCGTCCACCTGCCGGG CCATGTCGCGGACCCCGCCGCAGCGATTGGCCTTTTCGATCTTTTCGCGCTTTCCTCCGACAGCGAGCAGGCACCGCTTT CCGTGATCGAGGCGATGGCCGCCGGGCTCGCCGTGGTCAGCCCCGCCGTGGGCGATGTGGCGGACATGGTTTCAGAGGCG AACCGCCCCTACGTGATCCCGCCCGGAGACGACGATGCGCTGGCGGCGGCAGTTCGCGCGCTGGCGGGCGATGCGGCGCT TCGTGCGTCGATCGGCAAATCCAATCGCGCCCGCGCCCGGGCCGAGTTCGACGAAGGCGTCATGGCCGACCTCTACGCCA GGCTCTACGCGGGGGCGCTCGGCCGCGACAGCTTCTCGTGA
Upstream 100 bases:
>100_bases GCCCGGGCGTTGAACTGGTTACCTTGCCGCGTATCGGCCATGCCCCCACGCTCGACGAGCCGGAAAGCATCGCCGCAATC GGACGCCTGCTCGAACGGGT
Downstream 100 bases:
>100_bases TCGAGCCTCTTCAGGCGCGGTTCACGCGGGGCGGGTAGGAATCAATTCCGTTGAAAAGGCGGACCCATCCGCTAAACACC GCGCCAGACACACGCTAGCA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycogen Synthase; Group Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Hexosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSKAAPLRILHLHSTFDAGGKERRAVALMNRWARQGGARAIEHHIVSAQPGSMGARSLIDKRVAVFFPFGFPPLAGKLRL SRLQQLARAMRGFDLVLTYNWGAMDAAMAHAVFAPSMGLAPLVHHEDGFNADEAGGLKRGRNWYRMVALSRASALVVPSR GLEEIALGSWRQPRARVHRILNGIDTAAYARKPRPDVLPRVVKRPGEKWLGTLAGLRAVKNLPRMVRAMKALPPEWHLVI LGEGPEREAILAEAMRQEVGHRVHLPGHVADPAAAIGLFDLFALSSDSEQAPLSVIEAMAAGLAVVSPAVGDVADMVSEA NRPYVIPPGDDDALAAAVRALAGDAALRASIGKSNRARARAEFDEGVMADLYARLYAGALGRDSFS
Sequences:
>Translated_386_residues MSKAAPLRILHLHSTFDAGGKERRAVALMNRWARQGGARAIEHHIVSAQPGSMGARSLIDKRVAVFFPFGFPPLAGKLRL SRLQQLARAMRGFDLVLTYNWGAMDAAMAHAVFAPSMGLAPLVHHEDGFNADEAGGLKRGRNWYRMVALSRASALVVPSR GLEEIALGSWRQPRARVHRILNGIDTAAYARKPRPDVLPRVVKRPGEKWLGTLAGLRAVKNLPRMVRAMKALPPEWHLVI LGEGPEREAILAEAMRQEVGHRVHLPGHVADPAAAIGLFDLFALSSDSEQAPLSVIEAMAAGLAVVSPAVGDVADMVSEA NRPYVIPPGDDDALAAAVRALAGDAALRASIGKSNRARARAEFDEGVMADLYARLYAGALGRDSFS >Mature_385_residues SKAAPLRILHLHSTFDAGGKERRAVALMNRWARQGGARAIEHHIVSAQPGSMGARSLIDKRVAVFFPFGFPPLAGKLRLS RLQQLARAMRGFDLVLTYNWGAMDAAMAHAVFAPSMGLAPLVHHEDGFNADEAGGLKRGRNWYRMVALSRASALVVPSRG LEEIALGSWRQPRARVHRILNGIDTAAYARKPRPDVLPRVVKRPGEKWLGTLAGLRAVKNLPRMVRAMKALPPEWHLVIL GEGPEREAILAEAMRQEVGHRVHLPGHVADPAAAIGLFDLFALSSDSEQAPLSVIEAMAAGLAVVSPAVGDVADMVSEAN RPYVIPPGDDDALAAAVRALAGDAALRASIGKSNRARARAEFDEGVMADLYARLYAGALGRDSFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41552; Mature: 41420
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAAPLRILHLHSTFDAGGKERRAVALMNRWARQGGARAIEHHIVSAQPGSMGARSLID CCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHH KRVAVFFPFGFPPLAGKLRLSRLQQLARAMRGFDLVLTYNWGAMDAAMAHAVFAPSMGLA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PLVHHEDGFNADEAGGLKRGRNWYRMVALSRASALVVPSRGLEEIALGSWRQPRARVHRI CEEECCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCHHHHHHHH LNGIDTAAYARKPRPDVLPRVVKRPGEKWLGTLAGLRAVKNLPRMVRAMKALPPEWHLVI HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LGEGPEREAILAEAMRQEVGHRVHLPGHVADPAAAIGLFDLFALSSDSEQAPLSVIEAMA ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AGLAVVSPAVGDVADMVSEANRPYVIPPGDDDALAAAVRALAGDAALRASIGKSNRARAR HHHHHHCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AEFDEGVMADLYARLYAGALGRDSFS HHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKAAPLRILHLHSTFDAGGKERRAVALMNRWARQGGARAIEHHIVSAQPGSMGARSLID CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHH KRVAVFFPFGFPPLAGKLRLSRLQQLARAMRGFDLVLTYNWGAMDAAMAHAVFAPSMGLA CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCC PLVHHEDGFNADEAGGLKRGRNWYRMVALSRASALVVPSRGLEEIALGSWRQPRARVHRI CEEECCCCCCCCCCCCHHHCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCCCHHHHHHHH LNGIDTAAYARKPRPDVLPRVVKRPGEKWLGTLAGLRAVKNLPRMVRAMKALPPEWHLVI HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LGEGPEREAILAEAMRQEVGHRVHLPGHVADPAAAIGLFDLFALSSDSEQAPLSVIEAMA ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AGLAVVSPAVGDVADMVSEANRPYVIPPGDDDALAAAVRALAGDAALRASIGKSNRARAR HHHHHHCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AEFDEGVMADLYARLYAGALGRDSFS HHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA