Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198963
Identifier: 87198963
GI number: 87198963
Start: 988797
End: 989651
Strand: Direct
Name: 87198963
Synonym: Saro_0941
Alternate gene names: NA
Gene position: 988797-989651 (Clockwise)
Preceding gene: 87198960
Following gene: 87198964
Centisome position: 27.76
GC content: 66.78
Gene sequence:
>855_bases ATGGCCGAATACGAAGATCGCTACTGGACCAGCAGCGACGGACTGCGCCTGCATTTCCGCGCCTACGAAGGCGATATCTC CCGCCCGCCGGTCCTCTGCCTGCCCGGCCTGACCCGCAACGCCCGCGATTTCGAGGACCTTGCCACACGGCTGGCGGGCG ATTGGCGCGTGCTCTGTCCGGAAATGCGGGGACGGGGGGACAGCGACTACGCCAAGGACCCGATGACCTACCAGCCCATG CAGTATCTCCAGGATCTGGAGGCACTGCTCGCGCAGGAGGGCATCGAGCGTTTCGTCGCCATCGGCACTTCGCTGGGTGG CCTGCTGACGATGCTTCTGGCCGCCGCCAACCCGGCGCGCATCGCGGCTGCGGTGCTGAACGACGTCGGCCCGGAAGTCT CGCCGGAAGGGCTTGAGCGCATTCGCGGCTACGTCGGGCAGGGGCGCAACTTCGAAACCTGGATGCACGCCGCCCGCGCG CTGCAGGAAAGCAGCGGCGACGTCTATCCGGATTGGGACATCACCCAGTGGCTGCGCTACGCCAAGCGCATCATGGTGCT GGGCAGCAGCGGGCGCATCGCCTTCGACTACGACATGAAGATCGCAGAGCCGTTCGAGGCACCGGCGGGCGCAACGCCCC AGGTCGACATGTGGCCGCTGTTCGATGCGCTCGCCACACGGCCCCTGCTTGTCCTTCGTGGCGAAACGTCCGACATCCTC TCGGCGCAGACGGCAGCGAAGATGGCCTCGCGCCCGGGCGTTGAACTGGTTACCTTGCCGCGTATCGGCCATGCCCCCAC GCTCGACGAGCCGGAAAGCATCGCCGCAATCGGACGCCTGCTCGAACGGGTATGA
Upstream 100 bases:
>100_bases AGATCGCGTCTTGCGGGAGCGCCTTCATCCGGCAATAGTGGCCATGCGCAAGCCTGCCCGCAAGCAGGCCCCATGGATTT GACGCGGAATACCAGAAGAA
Downstream 100 bases:
>100_bases GCAAGGCCGCCCCGCTCAGGATTCTCCACCTTCATTCCACGTTCGATGCCGGGGGCAAGGAACGCCGCGCGGTGGCGCTG ATGAACCGCTGGGCACGGCA
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Hydrolases Or Acyltransferases; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydroxybutyrate-Dimer Hydrolase Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MAEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPM QYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARA LQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPAGATPQVDMWPLFDALATRPLLVLRGETSDIL SAQTAAKMASRPGVELVTLPRIGHAPTLDEPESIAAIGRLLERV
Sequences:
>Translated_284_residues MAEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPM QYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARA LQESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPAGATPQVDMWPLFDALATRPLLVLRGETSDIL SAQTAAKMASRPGVELVTLPRIGHAPTLDEPESIAAIGRLLERV >Mature_283_residues AEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQ YLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARAL QESSGDVYPDWDITQWLRYAKRIMVLGSSGRIAFDYDMKIAEPFEAPAGATPQVDMWPLFDALATRPLLVLRGETSDILS AQTAAKMASRPGVELVTLPRIGHAPTLDEPESIAAIGRLLERV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23200008, Length=271, Percent_Identity=28.0442804428044, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31440; Mature: 31309
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCP CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECH EMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPAR HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRY HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AKRIMVLGSSGRIAFDYDMKIAEPFEAPAGATPQVDMWPLFDALATRPLLVLRGETSDIL HHHEEEECCCCCEEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHH SAQTAAKMASRPGVELVTLPRIGHAPTLDEPESIAAIGRLLERV HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure AEYEDRYWTSSDGLRLHFRAYEGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCP CCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEECH EMRGRGDSDYAKDPMTYQPMQYLQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPAR HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IAAAVLNDVGPEVSPEGLERIRGYVGQGRNFETWMHAARALQESSGDVYPDWDITQWLRY HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AKRIMVLGSSGRIAFDYDMKIAEPFEAPAGATPQVDMWPLFDALATRPLLVLRGETSDIL HHHEEEECCCCCEEEEECCEECCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCHHHH SAQTAAKMASRPGVELVTLPRIGHAPTLDEPESIAAIGRLLERV HHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA