Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
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Accession | NC_007794 |
Length | 3,561,584 |
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The map label for this gene is 87198828
Identifier: 87198828
GI number: 87198828
Start: 857600
End: 857980
Strand: Direct
Name: 87198828
Synonym: Saro_0806
Alternate gene names: NA
Gene position: 857600-857980 (Clockwise)
Preceding gene: 87198827
Following gene: 87198830
Centisome position: 24.08
GC content: 63.78
Gene sequence:
>381_bases ATGTTCACTCATACCTTCCTGGGCACAAACGACATTGAAAAGTCCCGCAAGTTCTATTCGGCGGTGATGGAAACGCTGGG GCACACGACCGCCGTCCCGCTGCCTCATGGAACGGCGTTCCCTTCCGCCAACGGTTCGCTGGTCGTGGCCACGCCTGCCA ATGGCGAGGCGCATACCGTGTCGAACGGCTATACCCTGGGCTTCAAGGCGGCGGATTCGTCGGTCGTTGACGCATGGCAT GCGGCAGGCCTTGCCAATGGCGGCACTTGCGAAGGCGCGCCGGGCGTGCGCGAAAACTCGCCCGGCAAGCAGTACGGCGC GTACCTGCGCGATCCGGACGGCAACAAGATCTGCGCGTTCGCGCCCAACCCCAACGCCTGA
Upstream 100 bases:
>100_bases CAGCCCCTGCGGCGGACCTTTCGGCCCGATATGTTCGCCATTCCGGCGCCTCGATGGTGCCATTCATGAGTTTACGGCCT AATATGACGGAGAGAGGCAA
Downstream 100 bases:
>100_bases TCCCTTGCGGATCGCCGTCGTCCCGGCGCGCGCCCGGACGACGGCAAGCGGGTTGCACCAGGCCGCGACGTTCGTCCTAG ATGTCGGTGATTCCGTAAGG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Protein; Dioxygenase; Glyoxalase/Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Glyoxalase/Bleomycin Resistance; Isocitrate Dehydrogenase; Glyoxalase-Family Protein; Glyoxalase/Bleomycin Resistance Dioxygenase; Glyoxalase Family Protein Family Protein; Dioxygenase-Family Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFTHTFLGTNDIEKSRKFYSAVMETLGHTTAVPLPHGTAFPSANGSLVVATPANGEAHTVSNGYTLGFKAADSSVVDAWH AAGLANGGTCEGAPGVRENSPGKQYGAYLRDPDGNKICAFAPNPNA
Sequences:
>Translated_126_residues MFTHTFLGTNDIEKSRKFYSAVMETLGHTTAVPLPHGTAFPSANGSLVVATPANGEAHTVSNGYTLGFKAADSSVVDAWH AAGLANGGTCEGAPGVRENSPGKQYGAYLRDPDGNKICAFAPNPNA >Mature_126_residues MFTHTFLGTNDIEKSRKFYSAVMETLGHTTAVPLPHGTAFPSANGSLVVATPANGEAHTVSNGYTLGFKAADSSVVDAWH AAGLANGGTCEGAPGVRENSPGKQYGAYLRDPDGNKICAFAPNPNA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13009; Mature: 13009
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTHTFLGTNDIEKSRKFYSAVMETLGHTTAVPLPHGTAFPSANGSLVVATPANGEAHTV CCEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCEEEE SNGYTLGFKAADSSVVDAWHAAGLANGGTCEGAPGVRENSPGKQYGAYLRDPDGNKICAF CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE APNPNA CCCCCC >Mature Secondary Structure MFTHTFLGTNDIEKSRKFYSAVMETLGHTTAVPLPHGTAFPSANGSLVVATPANGEAHTV CCEECCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCEEEEECCCCCEEEE SNGYTLGFKAADSSVVDAWHAAGLANGGTCEGAPGVRENSPGKQYGAYLRDPDGNKICAF CCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEE APNPNA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA