Click here to switch to the map view.

The map label for this gene is 87198827

Identifier: 87198827

GI number: 87198827

Start: 855966

End: 857228

Strand: Direct

Name: 87198827

Synonym: Saro_0805

Alternate gene names: NA

Gene position: 855966-857228 (Clockwise)

Preceding gene: 87198826

Following gene: 87198828

Centisome position: 24.03

GC content: 68.57

Gene sequence:

>1263_bases
ATGAAGCGCCTAACCCTTGCCGCACTCGCCGCGCTGGCTGCCCTGCCGGTCGCTGCCGCCACGCCCCGCAGCCCAGAGGC
GGTTGCCGCCGCCGCCCTGAAAAGCGCACCGGTGTTCGACGGGCACAACGACGTGCCGGAGCAGTTGCGCGACCGGCGCA
AGGACGTGCTTGAAGGCTTCGATTTCCGCGACACCCGCGCGACGGGCGATGCGGCAACGGGGACGCCGCCGATGATGACC
GACATAGCCCGGATGCGTGCGGGACGGGTCGGGGCGCAGTTCTGGTCGGTCTACGTCTCGGCCAACTTGCCCGAGGCGCA
GGCAGTGCAGGCGACGCTCGAGCAGATCGACGTTACCCGGCGGCTGATCGCGCAGTATCCGGCGGACATGCAGTTCTGCA
CTGACAGCCGGTGCGTGGACGAGGCGTGGAAGCGCGGCCGGATCGCGTCGTTGATCGGCATGGAAGGGGGGCATTCGATT
GGCGGATCGCTGGGCGTGCTGCGGCAGATGCACGCGCTTGGCGCGCGCTACATGACGCTGACGCATTTCCGGAACACGGC
CTGGGCCGACAGCGCCACCGACGCGCCCCAACATGACGGGCTGACCCCGTTCGGCGAGAAGGTGGTGCGAGAGATGCAGC
GGCTGGGCATCCTGGTGGACCTTGCCCACGTGAGCGAGGCGACAATGCGCGACGTACTGGCGCTGGGTGGTCCCCCGCCC
ATCGTCAGTCATTCCAACGCGCGGGCCATCAACCACCACGCCCGCAACGTCTCGGACGAGACGCTGAAGGCCATCGGCGC
GGCGGGCGGGATCGTGATGGTGAATTTCTACCCGCCGTATGTGCTCGAAGCGGCCCGCCAGTGGAGCGCCGCGCGCGATG
CGGAGGTCGCGCGGACCAAGTCGCTCAACCGGGGCGATCCCTCGGCTGAGAAGGCCGCGCTGGATGCCTGGGACAAGGCC
AACCCCATGCCGCGCGGCAGCGTGCAGGATGTGGCCGATCATGTCGATCATATTGCCCGACTGACCGGCACGGACCACGT
GGGGCTGGGCGGCGACCTCGACGGGGTGGAAGCCACCATTGCCGGTCTCGACGATGCCGCGAGCTATCCCGCGCTGTTCG
TGGAATTGGCAAGGCGGGGCTGGTCGCAGGGCGATCTCGAGAAGCTGGCCAACGGCAACATGATGAGGGTCCTGCGGGTG
GCCGAAGCCTATGCCAGCCAGCACCGGGCCGACGGGCCGCTGGAAAGTCCGGTCGGCTTCTGA

Upstream 100 bases:

>100_bases
AGATCGCCGCCTTGTAGGACAGCCCCCTCTTTCAACCCGCCGAACCGCGCGGCCCGGCTTCGTGCTTGAGCGCGATGGCC
GTTCGGGCAAGGATACGCGG

Downstream 100 bases:

>100_bases
CCTGCCTGCATGATCGTGGGGAACTGCCATTTTGCCTCTCGACGCGGAACCGCGATACGGGCAGGAATGGTTTGTCTTAC
TTACAAGGCCGTAAACTCAT

Product: membrane dipeptidase

Products: NA

Alternate protein names: ORF R [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKRLTLAALAALAALPVAAATPRSPEAVAAAALKSAPVFDGHNDVPEQLRDRRKDVLEGFDFRDTRATGDAATGTPPMMT
DIARMRAGRVGAQFWSVYVSANLPEAQAVQATLEQIDVTRRLIAQYPADMQFCTDSRCVDEAWKRGRIASLIGMEGGHSI
GGSLGVLRQMHALGARYMTLTHFRNTAWADSATDAPQHDGLTPFGEKVVREMQRLGILVDLAHVSEATMRDVLALGGPPP
IVSHSNARAINHHARNVSDETLKAIGAAGGIVMVNFYPPYVLEAARQWSAARDAEVARTKSLNRGDPSAEKAALDAWDKA
NPMPRGSVQDVADHVDHIARLTGTDHVGLGGDLDGVEATIAGLDDAASYPALFVELARRGWSQGDLEKLANGNMMRVLRV
AEAYASQHRADGPLESPVGF

Sequences:

>Translated_420_residues
MKRLTLAALAALAALPVAAATPRSPEAVAAAALKSAPVFDGHNDVPEQLRDRRKDVLEGFDFRDTRATGDAATGTPPMMT
DIARMRAGRVGAQFWSVYVSANLPEAQAVQATLEQIDVTRRLIAQYPADMQFCTDSRCVDEAWKRGRIASLIGMEGGHSI
GGSLGVLRQMHALGARYMTLTHFRNTAWADSATDAPQHDGLTPFGEKVVREMQRLGILVDLAHVSEATMRDVLALGGPPP
IVSHSNARAINHHARNVSDETLKAIGAAGGIVMVNFYPPYVLEAARQWSAARDAEVARTKSLNRGDPSAEKAALDAWDKA
NPMPRGSVQDVADHVDHIARLTGTDHVGLGGDLDGVEATIAGLDDAASYPALFVELARRGWSQGDLEKLANGNMMRVLRV
AEAYASQHRADGPLESPVGF
>Mature_420_residues
MKRLTLAALAALAALPVAAATPRSPEAVAAAALKSAPVFDGHNDVPEQLRDRRKDVLEGFDFRDTRATGDAATGTPPMMT
DIARMRAGRVGAQFWSVYVSANLPEAQAVQATLEQIDVTRRLIAQYPADMQFCTDSRCVDEAWKRGRIASLIGMEGGHSI
GGSLGVLRQMHALGARYMTLTHFRNTAWADSATDAPQHDGLTPFGEKVVREMQRLGILVDLAHVSEATMRDVLALGGPPP
IVSHSNARAINHHARNVSDETLKAIGAAGGIVMVNFYPPYVLEAARQWSAARDAEVARTKSLNRGDPSAEKAALDAWDKA
NPMPRGSVQDVADHVDHIARLTGTDHVGLGGDLDGVEATIAGLDDAASYPALFVELARRGWSQGDLEKLANGNMMRVLRV
AEAYASQHRADGPLESPVGF

Specific function: Unknown

COG id: COG2355

COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M19 family [H]

Homologues:

Organism=Homo sapiens, GI189458885, Length=407, Percent_Identity=39.3120393120393, Blast_Score=278, Evalue=9e-75,
Organism=Homo sapiens, GI4758190, Length=407, Percent_Identity=39.3120393120393, Blast_Score=278, Evalue=9e-75,
Organism=Homo sapiens, GI11641269, Length=392, Percent_Identity=37.2448979591837, Blast_Score=254, Evalue=1e-67,
Organism=Homo sapiens, GI193211608, Length=393, Percent_Identity=36.8956743002545, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI193211610, Length=393, Percent_Identity=36.8956743002545, Blast_Score=245, Evalue=6e-65,
Organism=Drosophila melanogaster, GI221475880, Length=422, Percent_Identity=40.2843601895735, Blast_Score=294, Evalue=7e-80,
Organism=Drosophila melanogaster, GI281362638, Length=382, Percent_Identity=40.0523560209424, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI281362636, Length=382, Percent_Identity=40.0523560209424, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI161083233, Length=369, Percent_Identity=36.3143631436314, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21356391, Length=339, Percent_Identity=25.9587020648968, Blast_Score=124, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000180
- InterPro:   IPR008257 [H]

Pfam domain/function: PF01244 Peptidase_M19 [H]

EC number: NA

Molecular weight: Translated: 44988; Mature: 44988

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLTLAALAALAALPVAAATPRSPEAVAAAALKSAPVFDGHNDVPEQLRDRRKDVLEGF
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
DFRDTRATGDAATGTPPMMTDIARMRAGRVGAQFWSVYVSANLPEAQAVQATLEQIDVTR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
RLIAQYPADMQFCTDSRCVDEAWKRGRIASLIGMEGGHSIGGSLGVLRQMHALGARYMTL
HHHHHCCCCHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
THFRNTAWADSATDAPQHDGLTPFGEKVVREMQRLGILVDLAHVSEATMRDVLALGGPPP
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IVSHSNARAINHHARNVSDETLKAIGAAGGIVMVNFYPPYVLEAARQWSAARDAEVARTK
CCCCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SLNRGDPSAEKAALDAWDKANPMPRGSVQDVADHVDHIARLTGTDHVGLGGDLDGVEATI
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AGLDDAASYPALFVELARRGWSQGDLEKLANGNMMRVLRVAEAYASQHRADGPLESPVGF
HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKRLTLAALAALAALPVAAATPRSPEAVAAAALKSAPVFDGHNDVPEQLRDRRKDVLEGF
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC
DFRDTRATGDAATGTPPMMTDIARMRAGRVGAQFWSVYVSANLPEAQAVQATLEQIDVTR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHH
RLIAQYPADMQFCTDSRCVDEAWKRGRIASLIGMEGGHSIGGSLGVLRQMHALGARYMTL
HHHHHCCCCHHHHCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
THFRNTAWADSATDAPQHDGLTPFGEKVVREMQRLGILVDLAHVSEATMRDVLALGGPPP
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IVSHSNARAINHHARNVSDETLKAIGAAGGIVMVNFYPPYVLEAARQWSAARDAEVARTK
CCCCCCCHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
SLNRGDPSAEKAALDAWDKANPMPRGSVQDVADHVDHIARLTGTDHVGLGGDLDGVEATI
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AGLDDAASYPALFVELARRGWSQGDLEKLANGNMMRVLRVAEAYASQHRADGPLESPVGF
HCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2536663 [H]