Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 87198801

GI number: 87198801

Start: 826510

End: 827112

Strand: Direct

Name: uidR [C]

Synonym: Saro_0778

Alternate gene names: 87198801

Gene position: 826510-827112 (Clockwise)

Preceding gene: 87198796

Following gene: 87198802

Centisome position: 23.21

GC content: 65.84

Gene sequence:

>603_bases
ATGCCCGCCAAGAAGCCGTACCACCGCGAGAACCTGCGCCGCGACCTCCTCGATGCAGGCCGTGAATACGTTCGGCAGCA
CGGGCACCACGGGCTGTCGATCCGCACGCTGGCCCAGCAGGTCGGCGTCTCGCCCGGCGCGCCCTACCATCACTTCCCTG
ACCGGCGCTCGCTTCTGCTGGCGCTTGCCATCGAGGGCTTCGAAGAGATGCTCTACGGCGCCGAGCAGGTCAGGGCGAGC
GCCATGACTCCGGCCGAGAAGCTCAGCCGCATGGGGCTGCTGTTCATCCGCTTTGCCGAAGCCAATCCCTGCCTGCTCGA
CCTGATGTACGAGAGCGAGCTGACCTCGCCGGTGCTCGATCCCCAGCTGCTCGATTACCAGCTCAAGGGACATTTCAACT
TGCGCGATCATCTCACCGCGGCGCTCCCGGACATCAGCGACGAGGAAGCGGACCTTCGCGTGATTGCCTACTGGTCGGCG
ATCTATGGCTTTGCCTCGATGCGCAAGAAGGGCGTGATCCGGCCGAGCGAGCAGGCCGTGCCGAGCATCGACATCGCCGA
GGCGATCGTCGCCCGCGCAGCATTGGCCGCTCTCGCGGACTGA

Upstream 100 bases:

>100_bases
CTGCACGGGATAAGGTGGTTTCGGACTGGCCAGAGAGCGGTTTGCTGTTAGGGAAGCAATGTTATCGCCCACCTGCCTGC
CCGATCGCCCGAGAGATTTG

Downstream 100 bases:

>100_bases
ACCCGCTAACCGCCCTGGCTTGGCGGCGCATTCACCGCGCCCGCGCTCTTGCGTTCAATTGCAATCAAAGCAGTGATTAG
ATTTACGCTTGACGCTGACC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; AcrR Family Transcriptional Regulator; Transcription Regulator TetR Family Protein; TetR-Family Protein Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MPAKKPYHRENLRRDLLDAGREYVRQHGHHGLSIRTLAQQVGVSPGAPYHHFPDRRSLLLALAIEGFEEMLYGAEQVRAS
AMTPAEKLSRMGLLFIRFAEANPCLLDLMYESELTSPVLDPQLLDYQLKGHFNLRDHLTAALPDISDEEADLRVIAYWSA
IYGFASMRKKGVIRPSEQAVPSIDIAEAIVARAALAALAD

Sequences:

>Translated_200_residues
MPAKKPYHRENLRRDLLDAGREYVRQHGHHGLSIRTLAQQVGVSPGAPYHHFPDRRSLLLALAIEGFEEMLYGAEQVRAS
AMTPAEKLSRMGLLFIRFAEANPCLLDLMYESELTSPVLDPQLLDYQLKGHFNLRDHLTAALPDISDEEADLRVIAYWSA
IYGFASMRKKGVIRPSEQAVPSIDIAEAIVARAALAALAD
>Mature_199_residues
PAKKPYHRENLRRDLLDAGREYVRQHGHHGLSIRTLAQQVGVSPGAPYHHFPDRRSLLLALAIEGFEEMLYGAEQVRASA
MTPAEKLSRMGLLFIRFAEANPCLLDLMYESELTSPVLDPQLLDYQLKGHFNLRDHLTAALPDISDEEADLRVIAYWSAI
YGFASMRKKGVIRPSEQAVPSIDIAEAIVARAALAALAD

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22317; Mature: 22186

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAKKPYHRENLRRDLLDAGREYVRQHGHHGLSIRTLAQQVGVSPGAPYHHFPDRRSLLL
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALAIEGFEEMLYGAEQVRASAMTPAEKLSRMGLLFIRFAEANPCLLDLMYESELTSPVLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEECCCCCCEEHHHHHHHCCCCCCC
PQLLDYQLKGHFNLRDHLTAALPDISDEEADLRVIAYWSAIYGFASMRKKGVIRPSEQAV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCC
PSIDIAEAIVARAALAALAD
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAKKPYHRENLRRDLLDAGREYVRQHGHHGLSIRTLAQQVGVSPGAPYHHFPDRRSLLL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALAIEGFEEMLYGAEQVRASAMTPAEKLSRMGLLFIRFAEANPCLLDLMYESELTSPVLD
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCEEEEEECCCCCCEEHHHHHHHCCCCCCC
PQLLDYQLKGHFNLRDHLTAALPDISDEEADLRVIAYWSAIYGFASMRKKGVIRPSEQAV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCC
PSIDIAEAIVARAALAALAD
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA